Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| OQU83613 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G20370.1 | OQU83613 | AT5G38480.1 | 23613197 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os09t0513500-00 | Rice | cytosol, extracellular | 52.25 | 92.08 |
| TraesCS5D01G304400.1 | Wheat | cytosol | 88.2 | 88.2 |
| TraesCS5B01G296600.1 | Wheat | cytosol | 88.2 | 88.2 |
| Zm00001d006116_P001 | Maize | cytosol | 95.51 | 77.98 |
| TraesCS5A01G297300.1 | Wheat | cytosol | 87.64 | 76.47 |
| GSMUA_Achr3P21510_001 | Banana | cytosol | 70.22 | 72.25 |
| GSMUA_Achr1P17050_001 | Banana | cytosol | 69.1 | 71.1 |
| OQU83339 | Sorghum | cytosol | 65.73 | 66.1 |
| EES07110 | Sorghum | cytosol | 64.04 | 65.52 |
| EES11032 | Sorghum | cytosol | 64.04 | 65.52 |
| AT4G20370.1 | Thale cress | cytosol | 64.04 | 65.14 |
| KRH06761 | Soybean | cytosol | 62.92 | 64.0 |
| CDY16409 | Canola | cytosol | 62.36 | 63.43 |
| CDY60941 | Canola | cytosol | 62.36 | 63.43 |
| Bra022475.1-P | Field mustard | cytosol | 62.36 | 63.43 |
| Bra004117.1-P | Field mustard | cytosol | 61.24 | 62.29 |
| CDY07452 | Canola | cytosol | 61.24 | 62.29 |
| KXG31553 | Sorghum | cytosol | 60.11 | 61.85 |
| KRG94768 | Soybean | cytosol | 60.67 | 61.71 |
| CDY02016 | Canola | cytosol | 59.55 | 60.57 |
| PGSC0003DMT400041725 | Potato | cytosol | 60.11 | 60.45 |
| EER87876 | Sorghum | cytosol | 60.67 | 60.34 |
| PGSC0003DMT400060057 | Potato | cytosol | 58.43 | 60.12 |
| Bra015710.1-P | Field mustard | mitochondrion | 51.69 | 59.74 |
| EES16923 | Sorghum | cytosol | 58.99 | 59.32 |
| CDX87561 | Canola | cytosol | 58.99 | 59.32 |
| Solyc05g055660.1.1 | Tomato | cytosol | 46.63 | 59.29 |
| PGSC0003DMT400041726 | Potato | cytosol | 57.87 | 59.2 |
| Solyc11g008640.1.1 | Tomato | cytosol | 57.3 | 58.62 |
| CDY39282 | Canola | cytosol, mitochondrion, nucleus | 37.64 | 57.76 |
| KRH01790 | Soybean | cytosol | 56.74 | 57.39 |
| EER89918 | Sorghum | cytosol | 55.06 | 56.65 |
| KRH01791 | Soybean | cytosol | 54.49 | 56.07 |
| KRH46899 | Soybean | cytosol | 55.06 | 56.0 |
| Solyc05g053850.2.1 | Tomato | cytosol | 54.49 | 55.43 |
| EES04803 | Sorghum | cytosol | 55.06 | 53.85 |
| KXG22359 | Sorghum | cytosol | 52.25 | 53.14 |
| EES01474 | Sorghum | cytosol | 52.81 | 53.11 |
| AT1G65480.2 | Thale cress | cytosol | 64.61 | 52.51 |
| EES10600 | Sorghum | cytosol | 53.93 | 51.89 |
| KRH46900 | Soybean | cytosol | 25.28 | 51.14 |
| EES02614 | Sorghum | cytosol | 48.88 | 50.88 |
| EES16646 | Sorghum | cytosol | 49.44 | 50.87 |
| KRH01789 | Soybean | cytosol | 38.2 | 50.75 |
| EES09271 | Sorghum | cytosol | 48.31 | 49.71 |
| CDY13571 | Canola | cytosol | 56.18 | 49.51 |
| OQU86136 | Sorghum | cytosol, mitochondrion, plastid | 56.18 | 49.26 |
| EES12110 | Sorghum | cytosol | 47.75 | 49.13 |
| Solyc11g008660.1.1 | Tomato | cytosol | 35.96 | 48.85 |
| EES06907 | Sorghum | cytosol | 46.63 | 47.98 |
| KXG19938 | Sorghum | cytosol | 42.7 | 41.99 |
| CDY65847 | Canola | cytosol | 24.16 | 30.28 |
Protein Annotations
| EnsemblPlants:KXG35998 | EnsemblPlantsGene:SORBI_3002G262500 | Gene3D:3.90.280.10 | InterPro:IPR036610 | InterPro:PEBP | InterPro:PEBP-like_sf |
| InterPro:PEBP_euk | InterPro:Phosphotidylethanolamine-bd_CS | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF40 | PFAM:PF01161 | ProteinID:KXG35998 |
| ProteinID:KXG35998.1 | ScanProsite:PS01220 | SUPFAM:SSF49777 | UniParc:UPI00081ADE2A | UniProt:A0A1B6QDK5 | MapMan:27.8.1 |
Description
hypothetical protein
Coordinates
chr2:-:64751617..64757625
Molecular Weight (calculated)
19968.8 Da
IEP (calculated)
8.424
GRAVY (calculated)
-0.333
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRGRDPLAL SQVIGDVLDP FIKSATMRIN YGDKEITNGT GLRASAVFNA PHVEIEGHDQ TKLYTLVMVD PDAPSPSKPE YREYLHWLVT DIPEARDIRF
101: GNEIVPYESP RPPAGIHRIV FVLFKQQARQ TVYAPGWRQN FNIRDFSAIY NLGAPVAALY FNCQKESGVG GRRFLGSS
101: GNEIVPYESP RPPAGIHRIV FVLFKQQARQ TVYAPGWRQN FNIRDFSAIY NLGAPVAALY FNCQKESGVG GRRFLGSS
001: MAASVDPLVV GRVIGDVLDM FIPTANMSVY FGPKHITNGC EIKPSTAVNP PKVNISGHSD ELYTLVMTDP DAPSPSEPNM REWVHWIVVD IPGGTNPSRG
101: KEILPYMEPR PPVGIHRYIL VLFRQNSPVG LMVQQPPSRA NFSTRMFAGH FDLGLPVATV YFNAQKEPAS RRR
101: KEILPYMEPR PPVGIHRYIL VLFRQNSPVG LMVQQPPSRA NFSTRMFAGH FDLGLPVATV YFNAQKEPAS RRR
Arabidopsis Description
MFTProtein MOTHER of FT and TFL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XFK7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.