Factsheet for TraesCS5B01G020300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G151000.2
TraesCS4A01G268700.1
TraesCS4B01G045500.2
TraesCS4B01G159900.1
TraesCS4D01G046400.2
TraesCS4D01G155900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G20370.1	TraesCS4A01G151000.2	AT5G38480.1	23613197
AT4G20370.1	TraesCS4A01G268700.1	AT5G38480.1	23613197
AT4G20370.1	TraesCS4B01G045500.2	AT5G38480.1	23613197
AT4G20370.1	TraesCS4B01G159900.1	AT5G38480.1	23613197
AT4G20370.1	TraesCS4D01G046400.2	AT5G38480.1	23613197
AT4G20370.1	TraesCS4D01G155900.1	AT5G38480.1	23613197

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G347000.1	Wheat	cytosol	85.14	85.63
TraesCS2B01G365300.1	Wheat	cytosol	85.14	85.63
TraesCS2D01G345700.1	Wheat	cytosol	85.14	85.63
HORVU2Hr1G084540.1	Barley	cytosol	84.0	84.48
EES11032	Sorghum	cytosol	80.0	80.46
Zm00001d025737_P001	Maize	cytosol	80.0	80.0
Os04t0488400-01	Rice	cytosol	79.43	79.89
TraesCS6B01G244400.1	Wheat	cytosol	78.29	78.74
GSMUA_Achr10P...	Banana	cytosol	75.43	74.58
GSMUA_Achr3P02730_001	Banana	cytosol	75.43	73.74
GSMUA_Achr9P07900_001	Banana	cytosol	72.0	72.41
GSMUA_Achr2P20900_001	Banana	cytosol	71.43	71.84
Zm00001d003226_P001	Maize	cytosol	63.43	71.61
TraesCS4B01G073800.1	Wheat	cytosol	69.14	67.6
GSMUA_Achr2P05870_001	Banana	cytosol	71.43	67.57
TraesCS2B01G511400.1	Wheat	cytosol	62.29	63.37
Bra015710.1-P	Field mustard	mitochondrion	53.14	60.39
KRH06761	Soybean	cytosol	60.0	60.0
TraesCS5B01G152800.1	Wheat	cytosol	60.57	59.55
PGSC0003DMT400060057	Potato	cytosol	58.86	59.54
KRH01791	Soybean	cytosol	58.86	59.54
TraesCS7B01G013100.1	Wheat	cytosol	60.0	59.32
TraesCS2B01G567400.1	Wheat	cytosol	58.29	58.96
AT4G20370.1	Thale cress	cytosol	58.86	58.86
KRG94768	Soybean	cytosol	58.86	58.86
TraesCS5B01G296600.1	Wheat	cytosol	58.86	57.87
TraesCS2B01G567200.1	Wheat	cytosol	57.14	57.8
KRH46899	Soybean	cytosol	57.71	57.71
TraesCS3B01G015800.1	Wheat	cytosol	57.14	57.14
CDX87561	Canola	cytosol	57.71	57.06
Solyc11g008640.1.1	Tomato	cytosol	56.57	56.9
CDY60941	Canola	cytosol	56.57	56.57
CDY07452	Canola	cytosol	56.57	56.57
CDY02016	Canola	cytosol	56.57	56.57
CDY16409	Canola	cytosol	56.57	56.57
Bra022475.1-P	Field mustard	cytosol	56.57	56.57
Bra004117.1-P	Field mustard	cytosol	56.57	56.57
PGSC0003DMT400041726	Potato	cytosol	56.0	56.32
TraesCS3B01G015200.1	Wheat	cytosol	56.0	56.0
PGSC0003DMT400041725	Potato	cytosol	56.0	55.37
Solyc05g055660.1.1	Tomato	cytosol	44.0	55.0
TraesCS3B01G015600.2	Wheat	cytosol	54.86	54.86
KRH01790	Soybean	cytosol	54.86	54.55
KRH46900	Soybean	cytosol	26.86	53.41
CDY39282	Canola	cytosol, mitochondrion, nucleus	34.86	52.59
Solyc05g053850.2.1	Tomato	cytosol	52.57	52.57
TraesCS3B01G015700.1	Wheat	cytosol	52.0	52.0
TraesCS2B01G154800.1	Wheat	cytosol	50.86	51.45
TraesCS6B01G191200.1	Wheat	cytosol	53.14	50.82
TraesCS5B01G127600.1	Wheat	cytosol	49.14	49.71
TraesCS7B01G272600.1	Wheat	cytosol	48.57	49.13
TraesCS1B01G351100.1	Wheat	cytosol	49.71	48.33
TraesCS4B01G380600.1	Wheat	cytosol	49.14	48.04
TraesCS4B01G379100.1	Wheat	cytosol	49.14	47.78
AT1G65480.2	Thale cress	cytosol	59.43	47.49
Solyc11g008660.1.1	Tomato	cytosol	35.43	47.33
CDY13571	Canola	cytosol	53.71	46.53
TraesCS2B01G310700.1	Wheat	cytosol	45.71	46.24
TraesCS3B01G162000.1	Wheat	cytosol	56.0	45.79
KRH01789	Soybean	cytosol	34.86	45.52
TraesCS4B01G380500.1	Wheat	cytosol, nucleus, plastid	24.0	44.68
TraesCS4B01G307600.1	Wheat	cytosol	44.57	44.57
TraesCS3B01G010100.1	Wheat	cytosol	42.29	42.29
TraesCS3B01G007400.1	Wheat	cytosol	40.0	41.42
TraesCS7B01G195200.1	Wheat	cytosol	41.14	40.0
CDY65847	Canola	cytosol	20.0	24.65

Protein Annotations

EnsemblPlants:TraesCS5B01G020300.1	EnsemblPlantsGene:TraesCS5B01G020300	Gene3D:3.90.280.10	InterPro:IPR036610	InterPro:PEBP	InterPro:PEBP-like_sf
InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362	PANTHER:PTHR11362:SF23	PFAM:PF01161	ScanProsite:PS01220
SUPFAM:SSF49777	TIGR:cd00866	MapMan:27.8.1	:	:	:

Description

No Description!

Coordinates

chr5B:-:19790435..19792559

Molecular Weight (calculated)

19423.0 Da

IEP (calculated)

8.402

GRAVY (calculated)

-0.350

Length

175 amino acids

Sequence
(BLAST)

001: MSGETLAIGL VGDILDPFVK AASLKVLYNG KELINGSELK PSQVAYEPRV EIAGSDHDMR NLYTLVMVDP DAPSPSNPTA KEYLHWLVTD IPESTNASYG
101: NKLFSYERPN PTAGMHRFAF VLFRQSARQT IYAPGWRPNF NTRDFSAVYS LGPPVAAAFF NCQRENGSGG KRYIR

Best Arabidopsis Sequence Match ( AT1G65480.1 )
(BLAST)

001: MSINIRDPLI VSRVVGDVLD PFNRSITLKV TYGQREVTNG LDLRPSQVQN KPRVEIGGED LRNFYTLVMV DPDVPSPSNP HLREYLHWLV TDIPATTGTT
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL

Arabidopsis Description

FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.