Factsheet for TraesCS2B01G365300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G151000.2
TraesCS4A01G268700.1
TraesCS4B01G045500.2
TraesCS4B01G159900.1
TraesCS4D01G046400.2
TraesCS4D01G155900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G20370.1	TraesCS4A01G151000.2	AT5G38480.1	23613197
AT4G20370.1	TraesCS4A01G268700.1	AT5G38480.1	23613197
AT4G20370.1	TraesCS4B01G045500.2	AT5G38480.1	23613197
AT4G20370.1	TraesCS4B01G159900.1	AT5G38480.1	23613197
AT4G20370.1	TraesCS4D01G046400.2	AT5G38480.1	23613197
AT4G20370.1	TraesCS4D01G155900.1	AT5G38480.1	23613197

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G347000.1	Wheat	cytosol	99.43	99.43
TraesCS2D01G345700.1	Wheat	cytosol	98.85	98.85
HORVU2Hr1G084540.1	Barley	cytosol	98.28	98.28
Os04t0488400-01	Rice	cytosol	90.23	90.23
EES11032	Sorghum	cytosol	88.51	88.51
Zm00001d025737_P001	Maize	cytosol	87.93	87.43
TraesCS6B01G244400.1	Wheat	cytosol	87.36	87.36
TraesCS5B01G020300.1	Wheat	cytosol	85.63	85.14
GSMUA_Achr3P02730_001	Banana	cytosol	81.03	78.77
Zm00001d003226_P001	Maize	cytosol	70.11	78.71
GSMUA_Achr10P...	Banana	cytosol	79.89	78.53
GSMUA_Achr9P07900_001	Banana	cytosol	78.16	78.16
GSMUA_Achr2P20900_001	Banana	cytosol	77.59	77.59
TraesCS4B01G073800.1	Wheat	cytosol	77.01	74.86
GSMUA_Achr2P05870_001	Banana	cytosol	77.59	72.97
TraesCS2B01G511400.1	Wheat	cytosol	64.37	65.12
TraesCS5B01G152800.1	Wheat	cytosol	66.09	64.61
KRH06761	Soybean	cytosol	64.37	64.0
AT4G20370.1	Thale cress	cytosol	64.37	64.0
Bra015710.1-P	Field mustard	mitochondrion	56.32	63.64
PGSC0003DMT400060057	Potato	cytosol	63.22	63.58
KRG94768	Soybean	cytosol	63.79	63.43
TraesCS2B01G567400.1	Wheat	cytosol	62.64	63.01
TraesCS7B01G013100.1	Wheat	cytosol	63.79	62.71
CDY07452	Canola	cytosol	62.64	62.29
Bra004117.1-P	Field mustard	cytosol	62.64	62.29
Bra022475.1-P	Field mustard	cytosol	62.64	62.29
CDY16409	Canola	cytosol	62.64	62.29
CDY60941	Canola	cytosol	62.64	62.29
TraesCS2B01G567200.1	Wheat	cytosol	61.49	61.85
CDX87561	Canola	cytosol	62.07	61.02
TraesCS5B01G296600.1	Wheat	cytosol	62.07	60.67
CDY02016	Canola	cytosol	60.92	60.57
KRH01791	Soybean	cytosol	59.77	60.12
TraesCS3B01G015800.1	Wheat	cytosol	59.77	59.43
KRH46899	Soybean	cytosol	59.77	59.43
Solyc11g008640.1.1	Tomato	cytosol	59.2	59.2
TraesCS3B01G015200.1	Wheat	cytosol	59.2	58.86
CDY39282	Canola	cytosol, mitochondrion, nucleus	39.08	58.62
PGSC0003DMT400041725	Potato	cytosol	59.2	58.19
Solyc05g053850.2.1	Tomato	cytosol	58.05	57.71
TraesCS3B01G015600.2	Wheat	cytosol	58.05	57.71
PGSC0003DMT400041726	Potato	cytosol	57.47	57.47
KRH01790	Soybean	cytosol	58.05	57.39
Solyc05g055660.1.1	Tomato	cytosol	45.98	57.14
TraesCS3B01G015700.1	Wheat	cytosol	55.17	54.86
TraesCS2B01G154800.1	Wheat	cytosol	53.45	53.76
TraesCS5B01G127600.1	Wheat	cytosol	53.45	53.76
TraesCS2B01G310700.1	Wheat	cytosol	51.72	52.02
TraesCS6B01G191200.1	Wheat	cytosol	54.6	51.91
TraesCS7B01G272600.1	Wheat	cytosol	51.15	51.45
AT1G65480.2	Thale cress	cytosol	64.37	51.14
KRH46900	Soybean	cytosol	25.86	51.14
TraesCS4B01G307600.1	Wheat	cytosol	51.15	50.86
CDY13571	Canola	cytosol	58.05	50.0
TraesCS1B01G351100.1	Wheat	cytosol	51.72	50.0
TraesCS4B01G380600.1	Wheat	cytosol	51.15	49.72
TraesCS4B01G379100.1	Wheat	cytosol	50.57	48.89
TraesCS3B01G162000.1	Wheat	cytosol	59.77	48.6
TraesCS4B01G380500.1	Wheat	cytosol, nucleus, plastid	25.29	46.81
Solyc11g008660.1.1	Tomato	cytosol	34.48	45.8
KRH01789	Soybean	cytosol	34.48	44.78
TraesCS3B01G010100.1	Wheat	cytosol	44.83	44.57
TraesCS7B01G195200.1	Wheat	cytosol	45.4	43.89
TraesCS3B01G007400.1	Wheat	cytosol	42.53	43.79
CDY65847	Canola	cytosol	21.84	26.76

Protein Annotations

EnsemblPlants:TraesCS2B01G365300.1	EnsemblPlantsGene:TraesCS2B01G365300	Gene3D:3.90.280.10	InterPro:IPR036610	InterPro:PEBP	InterPro:PEBP-like_sf
InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362	PANTHER:PTHR11362:SF23	PFAM:PF01161	ScanProsite:PS01220
SUPFAM:SSF49777	TIGR:cd00866	MapMan:27.8.1	:	:	:

Description

No Description!

Coordinates

chr2B:-:519184873..519186836

Molecular Weight (calculated)

19423.1 Da

IEP (calculated)

9.031

GRAVY (calculated)

-0.330

Length

174 amino acids

Sequence
(BLAST)

001: MSREALAIGH VVGDILDPFV KAASLKVIYN GKELTNGSEL KPSQVATEPR IDIAGRDMRN LYTLVMVDPD SPSPSNPTKR EYLHWLVTDI PESTNASYGN
101: EVVSYESPKP TAGIHRFAFV LFRQSVRQTI YAPGWRPNFN TRDFSALYAL GPPVAAVFFN CQRENGCGGR RYIR

Best Arabidopsis Sequence Match ( AT1G65480.1 )
(BLAST)

001: MSINIRDPLI VSRVVGDVLD PFNRSITLKV TYGQREVTNG LDLRPSQVQN KPRVEIGGED LRNFYTLVMV DPDVPSPSNP HLREYLHWLV TDIPATTGTT
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL

Arabidopsis Description

FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.