Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0710800-01 | |
| Os11t0546900-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G20370.1 | Os03t0710800-01 | AT5G38480.1 | 23613197 |
| AT4G20370.1 | Os11t0546900-01 | AT5G38480.1 | 23613197 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024023_P001 | Maize | cytosol | 83.62 | 84.57 |
| HORVU5Hr1G048110.1 | Barley | cytosol | 83.62 | 83.15 |
| TraesCS5D01G159500.1 | Wheat | cytosol | 81.92 | 81.46 |
| TraesCS5B01G152800.1 | Wheat | cytosol | 81.92 | 81.46 |
| TraesCS5A01G154600.1 | Wheat | cytosol | 81.92 | 81.46 |
| EES16923 | Sorghum | cytosol | 80.79 | 80.79 |
| Os04t0488400-01 | Rice | cytosol | 70.62 | 71.84 |
| GSMUA_Achr9P07900_001 | Banana | cytosol | 69.49 | 70.69 |
| GSMUA_Achr2P20900_001 | Banana | cytosol | 69.49 | 70.69 |
| GSMUA_Achr10P... | Banana | cytosol | 67.23 | 67.23 |
| GSMUA_Achr3P02730_001 | Banana | cytosol | 67.8 | 67.04 |
| GSMUA_Achr2P05870_001 | Banana | cytosol | 69.49 | 66.49 |
| Os11t0293800-00 | Rice | cytosol | 71.19 | 66.32 |
| AT4G20370.1 | Thale cress | cytosol | 63.84 | 64.57 |
| Bra004117.1-P | Field mustard | cytosol | 62.15 | 62.86 |
| CDY07452 | Canola | cytosol | 62.15 | 62.86 |
| CDY60941 | Canola | cytosol | 61.58 | 62.29 |
| CDY16409 | Canola | cytosol | 61.58 | 62.29 |
| KRG94768 | Soybean | cytosol | 61.58 | 62.29 |
| Bra022475.1-P | Field mustard | cytosol | 61.58 | 62.29 |
| KRH06761 | Soybean | cytosol | 60.45 | 61.14 |
| CDX87561 | Canola | cytosol | 61.02 | 61.02 |
| Bra015710.1-P | Field mustard | mitochondrion | 52.54 | 60.39 |
| Os06t0157700-01 | Rice | nucleus | 61.02 | 60.34 |
| Os06t0157500-01 | Rice | nucleus | 60.45 | 60.11 |
| PGSC0003DMT400060057 | Potato | cytosol | 58.19 | 59.54 |
| CDY02016 | Canola | cytosol | 58.76 | 59.43 |
| Solyc05g053850.2.1 | Tomato | cytosol | 57.06 | 57.71 |
| PGSC0003DMT400041725 | Potato | cytosol | 57.63 | 57.63 |
| Solyc05g055660.1.1 | Tomato | cytosol | 45.2 | 57.14 |
| PGSC0003DMT400041726 | Potato | cytosol | 55.93 | 56.9 |
| KRH46899 | Soybean | cytosol | 55.93 | 56.57 |
| Os09t0513500-00 | Rice | cytosol, extracellular | 32.2 | 56.44 |
| KRH01791 | Soybean | cytosol | 54.8 | 56.07 |
| Solyc11g008640.1.1 | Tomato | cytosol | 54.8 | 55.75 |
| CDY39282 | Canola | cytosol, mitochondrion, nucleus | 36.16 | 55.17 |
| Os06t0552900-00 | Rice | extracellular | 53.11 | 54.34 |
| KRH01790 | Soybean | cytosol | 53.11 | 53.41 |
| KRH46900 | Soybean | cytosol | 26.55 | 53.41 |
| Os05t0518000-00 | Rice | cytosol | 50.85 | 51.72 |
| AT1G65480.2 | Thale cress | cytosol | 62.71 | 50.68 |
| Os01t0202700-00 | Rice | cytosol | 50.28 | 50.57 |
| Os04t0411400-01 | Rice | cytosol | 48.02 | 49.13 |
| Os02t0531600-01 | Rice | cytosol | 48.02 | 49.13 |
| Os11t0152500-00 | Rice | cytosol | 47.46 | 48.55 |
| CDY13571 | Canola | cytosol | 55.37 | 48.51 |
| Os01t0111600-01 | Rice | cytosol | 47.46 | 48.28 |
| Os12t0152000-00 | Rice | cytosol, extracellular | 46.89 | 47.98 |
| KRH01789 | Soybean | cytosol | 36.16 | 47.76 |
| Os01t0748800-00 | Rice | cytosol | 23.73 | 46.67 |
| Os06t0498800-01 | Rice | cytosol, extracellular, plastid | 46.33 | 46.59 |
| Solyc11g008660.1.1 | Tomato | cytosol | 34.46 | 46.56 |
| Os01t0218500-02 | Rice | cytosol, plastid | 64.41 | 41.3 |
| CDY65847 | Canola | cytosol | 26.55 | 33.1 |
| Os02t0232300-00 | Rice | cytosol | 33.9 | 32.43 |
Protein Annotations
| EnsemblPlants:Os12t0232300-00 | EnsemblPlantsGene:Os12g0232300 | EntrezGene:107276210 | Gene3D:3.90.280.10 | InterPro:IPR036610 | InterPro:PEBP |
| InterPro:PEBP-like_sf | InterPro:PEBP_euk | InterPro:Phosphotidylethanolamine-bd_CS | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF20 | PFAM:PF01161 |
| ProteinID:BAT16445.1 | ProteinID:EEE52982.1 | RefSeq:XP_015619436.1 | ScanProsite:PS01220 | SUPFAM:SSF49777 | UniParc:UPI0000F52891 |
| UniProt:B9GCH5 | MapMan:27.8.1 | : | : | : | : |
Description
FLOWERING TIME LIKE GENE 7Similar to ZCN20. (Os12t0232300-00)
Coordinates
chr12:+:7235000..7237115
Molecular Weight (calculated)
19374.9 Da
IEP (calculated)
8.461
GRAVY (calculated)
-0.308
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMSRDPLVV GSIVGDVVDH FGASALLRLF YNHREMTSGS ELRPSQVAGE PAVQITGGRD GRALYTLVMV DPDAPSPSNP SKREYLHWLV TDVPEGGDTS
101: KGTEVVAYES PRPTAGIHRL VFIVFRQTVR QSIYAPGWRS NFNTRDFAAC YSLGSPVAAA YFNCQREGGC GGRRYRS
101: KGTEVVAYES PRPTAGIHRL VFIVFRQTVR QSIYAPGWRS NFNTRDFAAC YSLGSPVAAA YFNCQREGGC GGRRYRS
001: MSINIRDPLI VSRVVGDVLD PFNRSITLKV TYGQREVTNG LDLRPSQVQN KPRVEIGGED LRNFYTLVMV DPDVPSPSNP HLREYLHWLV TDIPATTGTT
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL
Arabidopsis Description
FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.