Factsheet for Os06t0157500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

nucleus: 15276429

msms PMID: 15276429 doi

MM Khan, S Komatsu

Department of Molecular Genetics, National Institute of Agrobiological Sciences, Kannondai 2-1-2, Tsukuba 305-8602, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0157700-01	Rice	nucleus	90.45	89.94
Zm00001d036242_P001	Maize	cytosol	87.64	88.14
TraesCS7B01G013100.1	Wheat	cytosol	87.64	88.14
TraesCS7A01G115400.1	Wheat	cytosol	87.08	88.07
TraesCS7D01G111600.1	Wheat	cytosol	87.08	87.57
HORVU3Hr1G087100.1	Barley	cytosol	87.64	87.15
HORVU7Hr1G024610.1	Barley	cytosol	87.64	87.15
EER87876	Sorghum	cytosol	87.08	86.59
KRH70116	Soybean	mitochondrion	29.78	82.81
GSMUA_Achr10P...	Banana	cytosol	78.09	78.53
GSMUA_Achr4P08540_001	Banana	cytosol	78.09	77.65
Solyc11g008650.1.1	Tomato	mitochondrion	30.34	73.97
KRH08450	Soybean	cytosol	73.03	73.86
KRH08453	Soybean	cytosol	69.66	70.45
Os04t0488400-01	Rice	cytosol	61.24	62.64
KRH70112	Soybean	cytosol	41.01	62.39
Os11t0293800-00	Rice	cytosol	66.29	62.11
Os06t0552900-00	Rice	extracellular	60.11	61.85
Os12t0232300-00	Rice	cytosol	60.11	60.45
Os01t0748800-00	Rice	cytosol	30.34	60.0
Os05t0518000-00	Rice	cytosol	57.87	59.2
Os11t0152500-00	Rice	cytosol	57.3	58.96
Os12t0152000-00	Rice	cytosol, extracellular	56.74	58.38
Os04t0411400-01	Rice	cytosol	54.49	56.07
Os02t0531600-01	Rice	cytosol	54.49	56.07
Os01t0202700-00	Rice	cytosol	55.06	55.68
Os09t0513500-00	Rice	cytosol, extracellular	29.78	52.48
Os01t0218500-02	Rice	cytosol, plastid	79.21	51.09
Os06t0498800-01	Rice	cytosol, extracellular, plastid	50.0	50.57
Os01t0111600-01	Rice	cytosol	48.88	50.0
Os02t0232300-00	Rice	cytosol	41.01	39.46

Protein Annotations

MapMan:27.8.1	Gene3D:3.90.280.10	EntrezGene:4340184	EMBL:AB062676	ProteinID:AKQ09629.1	ProteinID:BAB78479.1
ProteinID:BAC21277.1	ProteinID:BAD69428.1	ProteinID:BAF18773.1	ProteinID:BAF92712.1	ProteinID:BAH30237.1	ProteinID:BAJ53917.1
ProteinID:BAO03062.1	ProteinID:BAO03070.1	ProteinID:BAO03084.1	ProteinID:BAO03089.1	ProteinID:BAO03113.1	ProteinID:BAO03114.1
ProteinID:BAO03115.1	ProteinID:BAO03116.1	ProteinID:BAO03117.1	ProteinID:BAO03118.1	ProteinID:BAO03119.1	ProteinID:BAO03120.1
ProteinID:BAO03121.1	ProteinID:BAO03122.1	ProteinID:BAO03123.1	ProteinID:BAO03124.1	ProteinID:BAO03125.1	ProteinID:BAO03126.1
ProteinID:BAO03127.1	ProteinID:BAO03128.1	ProteinID:BAO03130.1	ProteinID:BAO03131.1	ProteinID:BAO03132.1	ProteinID:BAO03133.1
ProteinID:BAO03134.1	ProteinID:BAO03135.1	ProteinID:BAO03136.1	ProteinID:BAO03137.1	ProteinID:BAO03138.1	ProteinID:BAO03139.1
ProteinID:BAO03140.1	ProteinID:BAO03141.1	ProteinID:BAO03142.1	ProteinID:BAO03143.1	ProteinID:BAO03144.1	ProteinID:BAO03145.1
ProteinID:BAO03146.1	ProteinID:BAO03147.1	ProteinID:BAO03152.1	ProteinID:BAO03153.1	ProteinID:BAO03154.1	ProteinID:BAO03155.1
ProteinID:BAO03156.1	ProteinID:BAO03157.1	ProteinID:BAO03158.1	ProteinID:BAO03159.1	ProteinID:BAO03160.1	ProteinID:BAO03161.1
ProteinID:BAO03202.1	ProteinID:BAO03203.1	ProteinID:BAO03205.1	ProteinID:BAO03206.1	ProteinID:BAO03208.1	ProteinID:BAO03209.1
ProteinID:BAO03210.1	ProteinID:BAO03220.1	ProteinID:BAS96251.1	UniProt:E5RQ92	ProteinID:EAZ35887.1	InterPro:FT
GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0007275	GO:GO:0008150	GO:GO:0008289	GO:GO:0008429
GO:GO:0009628	GO:GO:0009791	GO:GO:0009908	GO:GO:0009909	GO:GO:0009987	GO:GO:0010229
GO:GO:0030154	GO:GO:0048510	GO:GO:0048572	GO:GO:0048573	GO:GO:0048575	InterPro:IPR036610
EnsemblPlantsGene:Os06g0157500	EnsemblPlants:Os06t0157500-01	InterPro:PEBP	InterPro:PEBP-like_sf	InterPro:PEBP_euk	PFAM:PF01161
ScanProsite:PS01220	PANTHER:PTHR11362	PANTHER:PTHR11362:SF21	InterPro:Phosphotidylethanolamine-bd_CS	UniProt:Q8VWH2	SUPFAM:SSF49777
UniParc:UPI00000A4669	RefSeq:XP_015642519.1	:	:	:	:

Description

RICE FLOWERING-LOCUS T 1Florigen, Flowering time, Long-day promotion (Os06t0157500-01)

Coordinates

chr6:+:2926823..2928474

Molecular Weight (calculated)

19708.6 Da

IEP (calculated)

8.455

GRAVY (calculated)

-0.166

Length

178 amino acids

Sequence
(BLAST)

001: MAGSGRDDPL VVGRIVGDVL DPFVRITNLS VSYGARIVSN GCELKPSMVT QQPRVVVGGN DMRTFYTLVM VDPDAPSPSN PNLREYLHWL VTDIPGTTGA
101: TFGQEVMCYE SPRPTMGIHR LVFVLFQQLG RQTVYAPGWR QNFSTRNFAE LYNLGSPVAT VYFNCQREAG SGGRRVYP

Best Arabidopsis Sequence Match ( AT1G65480.2 )
(BLAST)

001: MQIRNSINMC RGFMPMIQIK EAETKTSKTE TINTEKPPVC SRSKMSINIR DPLIVSRVVG DVLDPFNRSI TLKVTYGQRE VTNGLDLRPS QVQNKPRVEI
101: GGEDLRNFYT LVMVDPDVPS PSNPHLREYL HWLVTDIPAT TGTTFGNEIV CYENPSPTAG IHRVVFILFR QLGRQTVYAP GWRQNFNTRE FAEIYNLGLP
201: VAAVFYNCQR ESGCGGRRL

Arabidopsis Description

FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.