Factsheet for Os06t0552900-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 3
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

extracellular: 18372294

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89918	Sorghum	cytosol	89.02	89.02
TraesCS2A01G132300.1	Wheat	cytosol	87.86	87.86
TraesCS2D01G134200.1	Wheat	cytosol	87.28	87.28
TraesCS2B01G154800.1	Wheat	cytosol	87.28	87.28
TraesCS7A01G355100.1	Wheat	cytosol	48.55	84.85
TraesCS7B01G272600.1	Wheat	cytosol	84.39	84.39
Zm00001d046300_P001	Maize	cytosol	86.13	79.68
HORVU2Hr1G023180.2	Barley	cytosol	85.55	79.57
GSMUA_Achr5P06600_001	Banana	cytosol	65.32	64.57
GSMUA_Achr5P06420_001	Banana	cytosol	64.16	63.43
GSMUA_Achr2P19360_001	Banana	cytosol	63.58	62.15
KRH06760	Soybean	cytosol	60.69	61.05
Os06t0157700-01	Rice	nucleus	62.43	60.34
Os06t0157500-01	Rice	nucleus	61.85	60.11
KRG94769	Soybean	cytosol	58.38	58.72
Os05t0518000-00	Rice	cytosol	56.07	55.75
Os04t0488400-01	Rice	cytosol	54.91	54.6
Os01t0202700-00	Rice	cytosol	54.34	53.41
Os01t0748800-00	Rice	cytosol	27.75	53.33
Os12t0232300-00	Rice	cytosol	54.34	53.11
Os11t0293800-00	Rice	cytosol	57.8	52.63
Os09t0513500-00	Rice	cytosol, extracellular	30.64	52.48
Os02t0531600-01	Rice	cytosol	52.02	52.02
Os12t0152000-00	Rice	cytosol, extracellular	52.02	52.02
Os11t0152500-00	Rice	cytosol	51.45	51.45
Os04t0411400-01	Rice	cytosol	51.45	51.45
Os01t0111600-01	Rice	cytosol	45.09	44.83
Os06t0498800-01	Rice	cytosol, extracellular, plastid	42.77	42.05
Os02t0232300-00	Rice	cytosol	44.51	41.62
Os01t0218500-02	Rice	cytosol, plastid	61.27	38.41

Protein Annotations

EnsemblPlants:Os06t0552900-00	EnsemblPlantsGene:Os06g0552900	EntrezGene:4341272	Gene3D:3.90.280.10	InterPro:IPR036610	InterPro:PEBP
InterPro:PEBP-like_sf	InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362	PANTHER:PTHR11362:SF33	PFAM:PF01161
ProteinID:BAD53668.1	ProteinID:BAF19756.1	ProteinID:BAS98202.1	ProteinID:EAZ37319.1	RefSeq:XP_015641828.1	ScanProsite:PS01220
SUPFAM:SSF49777	UniParc:UPI0000446E0F	UniProt:Q5Z9D9	MapMan:27.8.1	:	:

Description

FLOWERING TIME LIKE GENE 12Similar to SP3D. (Os06t0552900-00)

Coordinates

chr6:-:20971660..20974252

Molecular Weight (calculated)

19457.2 Da

IEP (calculated)

9.446

GRAVY (calculated)

-0.362

Length

173 amino acids

Sequence
(BLAST)

001: MANDSLTRSH IVGDVLDQFS NSVPLTVMYD GRPVFNGKEF RSSAVSMKPR VEIGGDDFRF AYTLVMVDPD APNPSNPTLR EYLHWMVTDI PSSTDDSFGR
101: EIVTYESPSP TMGIHRIVMV LYQQLGRGTV FAPQVRQNFN LRSFARRFNL GKPVAAMYFN CQRPTGTGGR RPT

Best Arabidopsis Sequence Match ( AT1G65480.1 )
(BLAST)

001: MSINIRDPLI VSRVVGDVLD PFNRSITLKV TYGQREVTNG LDLRPSQVQN KPRVEIGGED LRNFYTLVMV DPDVPSPSNP HLREYLHWLV TDIPATTGTT
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL

Arabidopsis Description

FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.