Factsheet for GSMUA_Achr5P06420_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P06600_001	Banana	cytosol	97.71	97.71
GSMUA_Achr2P19360_001	Banana	cytosol	85.14	84.18
GSMUA_Achr10P...	Banana	cytosol	67.43	67.82
GSMUA_Achr4P08540_001	Banana	cytosol	69.14	67.6
Zm00001d038725_P001	Maize	cytosol	45.14	67.52
KRH06760	Soybean	cytosol	65.71	66.86
KRG94769	Soybean	cytosol	64.57	65.7
Zm00001d043461_P001	Maize	cytosol	66.29	65.54
EER89918	Sorghum	cytosol	64.57	65.32
Os01t0748800-00	Rice	cytosol	33.14	64.44
TraesCS2D01G134200.1	Wheat	cytosol	63.43	64.16
TraesCS2A01G132300.1	Wheat	cytosol	63.43	64.16
Os06t0552900-00	Rice	extracellular	63.43	64.16
EES01474	Sorghum	cytosol	64.57	63.84
TraesCS2B01G154800.1	Wheat	cytosol	62.86	63.58
GSMUA_Achr2P19310_001	Banana	cytosol	63.43	63.43
KXG22359	Sorghum	cytosol	62.86	62.86
TraesCS4B01G380500.1	Wheat	cytosol, nucleus, plastid	33.71	62.77
Os05t0518000-00	Rice	cytosol	62.29	62.64
Zm00001d046300_P001	Maize	cytosol	66.86	62.57
GSMUA_Achr11P...	Banana	cytosol	61.71	62.43
TraesCS5A01G546900.1	Wheat	cytosol	63.43	62.36
GSMUA_Achr10P...	Banana	cytosol	62.86	62.15
HORVU4Hr1G090390.1	Barley	cytosol, nucleus, peroxisome	62.86	62.15
GSMUA_Achr9P07900_001	Banana	cytosol	61.71	62.07
TraesCS6B01G191200.1	Wheat	cytosol	64.57	61.75
TraesCSU01G130700.1	Wheat	cytosol	63.43	61.67
TraesCSU01G130900.1	Wheat	cytosol	62.86	61.45
TraesCS6A01G160200.1	Wheat	cytosol	64.0	61.2
TraesCS6D01G152500.1	Wheat	cytosol	64.0	61.2
GSMUA_Achr10P...	Banana	cytosol	61.71	61.02
TraesCS5A01G546800.1	Wheat	cytosol	63.43	60.99
TraesCS7B01G272600.1	Wheat	cytosol	60.0	60.69
GSMUA_Achr3P03070_001	Banana	cytosol	60.0	60.69
Zm00001d010752_P001	Maize	cytosol	60.57	60.57
TraesCS4B01G379100.1	Wheat	cytosol	62.29	60.56
TraesCSU01G130800.1	Wheat	cytosol, nucleus, peroxisome	62.86	60.44
TraesCS4B01G380600.1	Wheat	cytosol	61.71	60.34
TraesCS1D01G340800.1	Wheat	cytosol	61.71	60.34
GSMUA_Achr1P17050_001	Banana	cytosol	59.43	60.12
GSMUA_Achr10P...	Banana	cytosol	59.43	60.12
TraesCS1B01G351100.1	Wheat	cytosol	61.71	60.0
HORVU1Hr1G076430.1	Barley	cytosol	61.71	60.0
GSMUA_Achr2P20900_001	Banana	cytosol	59.43	59.77
TraesCS7A01G355100.1	Wheat	cytosol	33.71	59.6
GSMUA_Achr3P21510_001	Banana	cytosol	58.86	59.54
GSMUA_Achr2P05870_001	Banana	cytosol	62.86	59.46
TraesCS1A01G338600.1	Wheat	cytosol	61.14	59.44
EES04803	Sorghum	cytosol	61.71	59.34
Zm00001d016253_P001	Maize	cytosol	62.29	59.24
GSMUA_Achr3P02730_001	Banana	cytosol	60.57	59.22
HORVU2Hr1G023180.2	Barley	cytosol	62.86	59.14
GSMUA_Achr8P07730_001	Banana	cytosol	58.86	58.86
GSMUA_Achr3P22720_001	Banana	cytosol	58.29	58.62
GSMUA_Achr5P20040_001	Banana	cytosol	57.71	58.38
GSMUA_Achr10P...	Banana	cytosol	56.0	56.32
EES10600	Sorghum	cytosol	59.43	56.22
Zm00001d004010_P001	Maize	cytosol	30.86	51.92
GSMUA_Achr6P09410_001	Banana	cytosol	46.29	47.09
GSMUA_Achr3P20880_001	Banana	cytosol	46.29	47.09
GSMUA_AchrUn_...	Banana	cytosol	45.14	45.93
Os02t0232300-00	Rice	cytosol	44.57	42.16

Protein Annotations

MapMan:27.8.1	Gene3D:3.90.280.10	InterPro:FT	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488
GO:GO:0007275	GO:GO:0008150	GO:GO:0008289	GO:GO:0008429	GO:GO:0009628	GO:GO:0009791
GO:GO:0009908	GO:GO:0009909	GO:GO:0048573	EnsemblPlantsGene:GSMUA_Achr5G06420_001	EnsemblPlants:GSMUA_Achr5P06420_001	EnsemblPlants:GSMUA_Achr5T06420_001
InterPro:IPR036610	UniProt:M0SW71	InterPro:PEBP	InterPro:PEBP-like_sf	InterPro:PEBP_euk	PFAM:PF01161
ScanProsite:PS01220	PANTHER:PTHR11362	PANTHER:PTHR11362:SF21	InterPro:Phosphotidylethanolamine-bd_CS	SUPFAM:SSF49777	UniParc:UPI0002967A45

Description

Protein FLOWERING LOCUS T [Source:GMGC_GENE;Acc:GSMUA_Achr5G06420_001]

Coordinates

chr5:-:4708329..4709190

Molecular Weight (calculated)

19520.4 Da

IEP (calculated)

9.344

GRAVY (calculated)

-0.289

Length

175 amino acids

Sequence
(BLAST)

001: MSRGPLTLGQ VIGDVLDPFS RSVSLGVLYK NKLVINGSDF KPSAVVDKPK VEVGGDDLRT FYTLVMVDPD APNPSNPTLK EYLHWLVTDI PATTNASFGR
101: ELVCYESPRP TAGIHRMVFV LLRQMGRGTV FAPQMRHNFS TRRFAEQYYL APVAATYYNC QREAGTGGRR FRGDD

Best Arabidopsis Sequence Match ( AT1G65480.1 )
(BLAST)

001: MSINIRDPLI VSRVVGDVLD PFNRSITLKV TYGQREVTNG LDLRPSQVQN KPRVEIGGED LRNFYTLVMV DPDVPSPSNP HLREYLHWLV TDIPATTGTT
101: FGNEIVCYEN PSPTAGIHRV VFILFRQLGR QTVYAPGWRQ NFNTREFAEI YNLGLPVAAV FYNCQRESGC GGRRL

Arabidopsis Description

FTPEBP (phosphatidylethanolamine-binding protein) family protein [Source:TAIR;Acc:AT1G65480]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.