Factsheet for GSMUA_Achr11P21720_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P20040_001	Banana	cytosol	86.13	86.13
KRH09103	Soybean	cytosol	78.61	79.07
KRH38557	Soybean	cytosol	78.03	78.03
Solyc03g026050.2.1	Tomato	cytosol	75.72	74.86
PGSC0003DMT400037143	Potato	cytosol	75.14	74.29
GSMUA_Achr3P03070_001	Banana	cytosol	73.99	73.99
VIT_16s0100g00700.t01	Wine grape	cytosol	73.41	73.41
GSMUA_Achr8P07730_001	Banana	cytosol	73.99	73.14
GSMUA_Achr10P...	Banana	cytosol	72.83	72.83
GSMUA_Achr3P22720_001	Banana	cytosol	72.83	72.41
PGSC0003DMT400030575	Potato	cytosol	72.83	72.0
Solyc01g009560.1.1	Tomato	cytosol	70.52	69.71
GSMUA_Achr10P...	Banana	cytosol	69.94	69.54
Bra010052.1-P	Field mustard	cytosol	69.36	67.8
AT5G62040.1	Thale cress	cytosol	67.63	66.1
PGSC0003DMT400030582	Potato	cytosol	33.53	65.17
GSMUA_Achr10P...	Banana	cytosol	64.16	63.79
GSMUA_Achr5P06420_001	Banana	cytosol	62.43	61.71
GSMUA_Achr5P06600_001	Banana	cytosol	61.85	61.14
GSMUA_Achr2P19360_001	Banana	cytosol	61.27	59.89
GSMUA_Achr2P19310_001	Banana	cytosol	60.12	59.43
GSMUA_Achr9P07900_001	Banana	cytosol	58.96	58.62
GSMUA_Achr10P...	Banana	cytosol	59.54	58.19
GSMUA_Achr4P08540_001	Banana	cytosol	60.12	58.1
CDY00248	Canola	cytosol	69.36	57.97
CDX86931	Canola	cytosol	69.36	57.97
GSMUA_Achr10P...	Banana	cytosol	57.8	56.5
Solyc01g009580.1.1	Tomato	plastid	72.25	56.31
GSMUA_Achr2P20900_001	Banana	cytosol	55.49	55.17
GSMUA_Achr2P05870_001	Banana	cytosol	58.96	55.14
GSMUA_Achr3P21510_001	Banana	cytosol	54.34	54.34
GSMUA_Achr3P02730_001	Banana	cytosol	55.49	53.63
GSMUA_Achr1P17050_001	Banana	cytosol	52.6	52.6
GSMUA_Achr6P09410_001	Banana	cytosol	51.45	51.74
GSMUA_Achr3P20880_001	Banana	cytosol	51.45	51.74
GSMUA_AchrUn_...	Banana	cytosol	49.71	50.0

Protein Annotations

EnsemblPlants:GSMUA_Achr11P21720_001	EnsemblPlants:GSMUA_Achr11T21720_001	EnsemblPlantsGene:GSMUA_Achr11G21720_001	Gene3D:3.90.280.10	InterPro:IPR036610	InterPro:PEBP
InterPro:PEBP-like_sf	InterPro:PEBP_euk	InterPro:Phosphotidylethanolamine-bd_CS	PANTHER:PTHR11362	PANTHER:PTHR11362:SF22	PFAM:PF01161
ScanProsite:PS01220	SUPFAM:SSF49777	UniParc:UPI0002964F9E	UniProt:M0RUA2	MapMan:27.8.1	:

Description

CEN-like protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G21720_001]

Coordinates

chr11:-:22213775..22214677

Molecular Weight (calculated)

19479.2 Da

IEP (calculated)

8.450

GRAVY (calculated)

-0.330

Length

173 amino acids

Sequence
(BLAST)

001: MTRMLDPLTV GRVIGDVLDS FNPSVKLEVV YGPNKRVYNG HEFMPSAVCA KPRVEIGGDD MRSFYTLILT DPDAPSPSDP HLREHLHWIV TDIPGTTNVS
101: FGREIVGYEA PKPFIGIHRY VFVLFKQKGR QTVYAPASRD HFSTRDFSEE NGLGLPVAAV YFNAQRETAA RRR

Best Arabidopsis Sequence Match ( AT5G62040.1 )
(BLAST)

001: MSREIEPLIV GRVIGDVLEM FNPSVTMRVT FNSNTIVSNG HELAPSLLLS KPRVEIGGQD LRSFFTLIMM DPDAPSPSNP YMREYLHWMV TDIPGTTDAS
101: FGREIVRYET PKPVAGIHRY VFALFKQRGR QAVKAAPETR ECFNTNAFSS YFGLSQPVAA VYFNAQRETA PRRRPSY

Arabidopsis Description

BFTProtein BROTHER of FT and TFL 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.