Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- vacuole 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400030575 | Potato | cytosol | 75.23 | 95.43 |
| PGSC0003DMT400030582 | Potato | cytosol | 37.39 | 93.26 |
| Solyc01g009560.1.1 | Tomato | cytosol | 72.97 | 92.57 |
| Solyc03g026050.2.1 | Tomato | cytosol | 64.86 | 82.29 |
| KRH09103 | Soybean | cytosol | 63.51 | 81.98 |
| KRH38557 | Soybean | cytosol | 62.61 | 80.35 |
| VIT_16s0100g00700.t01 | Wine grape | cytosol | 60.81 | 78.03 |
| GSMUA_Achr11P... | Banana | cytosol | 56.31 | 72.25 |
| GSMUA_Achr5P20040_001 | Banana | cytosol | 54.05 | 69.36 |
| Solyc06g074350.2.1 | Tomato | cytosol | 53.6 | 68.0 |
| Solyc09g009560.1.1 | Tomato | cytosol | 51.35 | 66.28 |
| Bra010052.1-P | Field mustard | cytosol | 52.7 | 66.1 |
| AT5G62040.1 | Thale cress | cytosol | 52.7 | 66.1 |
| CDY00248 | Canola | cytosol | 54.95 | 58.94 |
| CDX86931 | Canola | cytosol | 54.95 | 58.94 |
| Solyc05g055660.1.1 | Tomato | cytosol | 34.68 | 55.0 |
| Solyc03g063100.1.1 | Tomato | cytosol | 43.24 | 54.24 |
| Solyc11g008650.1.1 | Tomato | mitochondrion | 17.57 | 53.42 |
| Solyc03g119100.1.1 | Tomato | cytosol | 39.64 | 50.87 |
| Solyc05g053850.2.1 | Tomato | cytosol | 40.09 | 50.86 |
| Solyc02g079290.2.1 | Tomato | cytosol | 40.09 | 50.0 |
| Solyc11g008640.1.1 | Tomato | cytosol | 36.94 | 47.13 |
| Solyc11g008660.1.1 | Tomato | cytosol | 25.23 | 42.75 |
Protein Annotations
| EnsemblPlants:Solyc01g009580.1.1 | EnsemblPlantsGene:Solyc01g009580.1 | Gene3D:3.90.280.10 | InterPro:IPR036610 | InterPro:PEBP | InterPro:PEBP-like_sf |
| InterPro:PEBP_euk | InterPro:Phosphotidylethanolamine-bd_CS | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF22 | PFAM:PF01161 | ScanProsite:PS01220 |
| SUPFAM:SSF49777 | UniParc:UPI0002763730 | UniProt:K4ATF4 | MapMan:27.8.1 | : | : |
Description
No Description!
Coordinates
chr1:+:3828755..3830538
Molecular Weight (calculated)
24803.0 Da
IEP (calculated)
10.068
GRAVY (calculated)
-0.218
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTSSKATSA ITQSVVYIKS SLQVKLLKPS HIYLSIASIA YTKKTHNMSC RDIEPLIVAR VIGEVVDSFN PSVKMNVIYN GTKQVFNGHE LMPLVIASKP
101: RVEIGGEDMR SAYTLIMTDP DVPGPSDPYL REHLHWIVTD IPGSTDVSFG KEIVSYESPK PVIGIHRYVF ILYKQNRGRQ TVKPPVTRDH FNARKFAVEN
201: GLGSPVAAVY FNAQRETAAR RR
101: RVEIGGEDMR SAYTLIMTDP DVPGPSDPYL REHLHWIVTD IPGSTDVSFG KEIVSYESPK PVIGIHRYVF ILYKQNRGRQ TVKPPVTRDH FNARKFAVEN
201: GLGSPVAAVY FNAQRETAAR RR
001: MARISSDPLM VGRVIGDVVD NCLQAVKMTV TYNSDKQVYN GHELFPSVVT YKPKVEVHGG DMRSFFTLVM TDPDVPGPSD PYLREHLHWI VTDIPGTTDV
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR
101: SFGKEIIGYE MPRPNIGIHR FVYLLFKQTR RGSVVSVPSY RDQFNTREFA HENDLGLPVA AVFFNCQRET AARRR
Arabidopsis Description
CENProtein CENTRORADIALIS-like [Source:UniProtKB/Swiss-Prot;Acc:Q9ZNV5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.