Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010052.1-P | Field mustard | cytosol | 90.4 | 90.4 |
| CDY00248 | Canola | cytosol | 90.4 | 77.29 |
| CDX86931 | Canola | cytosol | 89.83 | 76.81 |
| KRH09103 | Soybean | cytosol | 68.36 | 70.35 |
| PGSC0003DMT400037143 | Potato | cytosol | 68.93 | 69.71 |
| Solyc03g026050.2.1 | Tomato | cytosol | 68.36 | 69.14 |
| KRH38557 | Soybean | cytosol | 67.23 | 68.79 |
| VIT_16s0100g00700.t01 | Wine grape | cytosol | 66.67 | 68.21 |
| GSMUA_Achr11P... | Banana | cytosol | 66.1 | 67.63 |
| PGSC0003DMT400030575 | Potato | cytosol | 66.67 | 67.43 |
| Solyc01g009560.1.1 | Tomato | cytosol | 64.97 | 65.71 |
| GSMUA_Achr5P20040_001 | Banana | cytosol | 63.28 | 64.74 |
| PGSC0003DMT400030582 | Potato | cytosol | 31.64 | 62.92 |
| AT2G27550.1 | Thale cress | cytosol | 58.19 | 58.86 |
| AT5G03840.1 | Thale cress | cytosol | 58.19 | 58.19 |
| AT4G20370.1 | Thale cress | cytosol | 54.8 | 55.43 |
| Solyc01g009580.1.1 | Tomato | plastid | 66.1 | 52.7 |
| AT1G18100.1 | Thale cress | cytosol | 48.59 | 49.71 |
| AT1G65480.2 | Thale cress | cytosol | 58.19 | 47.03 |
Protein Annotations
| MapMan:27.8.1 | Gene3D:3.90.280.10 | EntrezGene:836324 | ProteinID:AED97554.1 | ArrayExpress:AT5G62040 | EnsemblPlantsGene:AT5G62040 |
| RefSeq:AT5G62040 | TAIR:AT5G62040 | RefSeq:AT5G62040-TAIR-G | EnsemblPlants:AT5G62040.1 | TAIR:AT5G62040.1 | ProteinID:BAB10165.1 |
| GO:GO:0000003 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0010228 | InterPro:IPR036610 | RefSeq:NP_201010.1 |
| InterPro:PEBP | InterPro:PEBP-like_sf | InterPro:PEBP_euk | PFAM:PF01161 | PO:PO:0000013 | PO:PO:0000014 |
| PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007095 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0008019 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0020030 | PO:PO:0025022 | ScanProsite:PS01220 | PANTHER:PTHR11362 | PANTHER:PTHR11362:SF22 |
| InterPro:Phosphotidylethanolamine-bd_CS | UniProt:Q9FIT4 | SUPFAM:SSF49777 | UniParc:UPI00001268CB | : | : |
Description
BFTProtein BROTHER of FT and TFL 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIT4]
Coordinates
chr5:+:24922802..24923797
Molecular Weight (calculated)
20009.0 Da
IEP (calculated)
9.375
GRAVY (calculated)
-0.271
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MSREIEPLIV GRVIGDVLEM FNPSVTMRVT FNSNTIVSNG HELAPSLLLS KPRVEIGGQD LRSFFTLIMM DPDAPSPSNP YMREYLHWMV TDIPGTTDAS
101: FGREIVRYET PKPVAGIHRY VFALFKQRGR QAVKAAPETR ECFNTNAFSS YFGLSQPVAA VYFNAQRETA PRRRPSY
101: FGREIVRYET PKPVAGIHRY VFALFKQRGR QAVKAAPETR ECFNTNAFSS YFGLSQPVAA VYFNAQRETA PRRRPSY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.