Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51676 | Soybean | nucleus | 58.7 | 47.37 |
| GSMUA_Achr1P02630_001 | Banana | nucleus | 10.33 | 40.43 |
| KRH28841 | Soybean | nucleus | 20.11 | 29.37 |
| GSMUA_Achr9P21040_001 | Banana | nucleus | 28.26 | 26.8 |
| GSMUA_Achr4P05090_001 | Banana | nucleus | 24.46 | 26.16 |
| KRH76618 | Soybean | nucleus | 25.0 | 25.56 |
| GSMUA_Achr5P11470_001 | Banana | nucleus | 26.63 | 23.56 |
| GSMUA_Achr2P03490_001 | Banana | nucleus | 26.09 | 23.53 |
| GSMUA_Achr1P02640_001 | Banana | nucleus | 18.48 | 22.82 |
| GSMUA_Achr4P29580_001 | Banana | nucleus | 22.83 | 21.65 |
| GSMUA_Achr5P17850_001 | Banana | nucleus | 26.09 | 19.83 |
| GSMUA_Achr5P11220_001 | Banana | nucleus, plastid | 27.72 | 19.39 |
| GSMUA_Achr9P24090_001 | Banana | nucleus | 18.48 | 19.21 |
| KRH69737 | Soybean | nucleus | 23.91 | 18.26 |
| GSMUA_Achr2P11200_001 | Banana | nucleus | 23.37 | 17.62 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:778127 | EMBL:ACUP02002143 | ncoils:Coil | EMBL:DQ787033 |
| EnsemblPlantsGene:GLYMA_04G022100 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR004827 | EnsemblPlants:KRH61011 | ProteinID:KRH61011 | ProteinID:KRH61011.1 | PFAM:PF00170 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF137 | UniProt:Q0GPI1 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI0000DDB483 | InterPro:bZIP | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:1728744..1731095
Molecular Weight (calculated)
20631.2 Da
IEP (calculated)
8.629
GRAVY (calculated)
-0.653
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MASWPPKPTE IFCVHAREKA MASSPCDCWP HLSPPSSIEH VWNDIKLDSL SNSPVDIDFN NNHSVSDSSF LNLTSTSSSV FHKHDHDHSL LSVSNTSFEA
101: SGSKKTTLLD QRHARIIKNR ESAVRSRARK QAYRKGLEVE IARLTEENSR LKRQLKELQC CLSSSDNPPT PRMAALCRTS SSPF
101: SGSKKTTLLD QRHARIIKNR ESAVRSRARK QAYRKGLEVE IARLTEENSR LKRQLKELQC CLSSSDNPPT PRMAALCRTS SSPF
001: MEEVWKEINL GSLHYHRQLN IGHEPMLKNQ NPNNSIFQDF LNMPLNQPPP PPPPPSSSTI VTALYGSLPL PPPATVLSLN SGVGFEFLDT TENLLASNPR
101: SFEESAKFGC LGKKRGQDSD DTRGDRRYKR MIKNRESAAR SRARKQAYTN ELELEIAHLQ TENARLKIQQ EQLKIAEATQ NQVKKTLQRS STAPF
101: SFEESAKFGC LGKKRGQDSD DTRGDRRYKR MIKNRESAAR SRARKQAYTN ELELEIAHLQ TENARLKIQQ EQLKIAEATQ NQVKKTLQRS STAPF
Arabidopsis Description
ATBZIP27basic region/leucine zipper motif 27 [Source:TAIR;Acc:AT2G17770]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.