Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G290200.1 | Wheat | cytosol | 93.75 | 93.75 |
| Os07t0470300-00 | Rice | cytosol | 58.93 | 60.55 |
| Os08t0250300-00 | Rice | cytosol | 58.93 | 57.89 |
| Os07t0251301-00 | Rice | cytosol | 55.36 | 56.36 |
| GSMUA_Achr3P31180_001 | Banana | plasma membrane | 51.79 | 51.79 |
| TraesCS1D01G276700.1 | Wheat | extracellular | 49.11 | 49.11 |
| TraesCS2D01G291600.1 | Wheat | unclear | 49.11 | 48.67 |
| GSMUA_Achr7P25500_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 49.11 | 47.83 |
| GSMUA_Achr4P02910_001 | Banana | cytosol | 48.21 | 47.37 |
| HORVU7Hr1G091910.1 | Barley | plastid | 74.11 | 41.09 |
Protein Annotations
| Gene3D:1.10.10.1410 | MapMan:17.1.2.1.47 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0006414 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| InterPro:IPR038716 | HAMAP:MF_01478 | InterPro:P1/P2_N_sf | PFAM:PF00428 | PANTHER:PTHR21141 | PANTHER:PTHR21141:SF38 |
| InterPro:Ribosomal_L12 | EnsemblPlantsGene:TraesCS7D01G384000 | EnsemblPlants:TraesCS7D01G384000.1 | TIGR:cd05833 | SEG:seg | : |
Description
No Description!
Coordinates
chr7D:-:497976156..497976494
Molecular Weight (calculated)
11739.6 Da
IEP (calculated)
4.019
GRAVY (calculated)
-0.364
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MRFVAAYLLA TLGGNPSPTK DDVRAILGSV GAEVEEGKLD ALFKEVEGKD LAELLAAGRE KFAFAPSGGA GAAMGASPAA AGDAAEEKKE KAEEKKEEDE
101: EEEDLDMFSL FD
101: EEEDLDMFSL FD
1: MKVVAAYLLA VLSGKASPTS ADIKTILGSV GAETEDSQIE LLLKEVKGKD LAELIAAGRE KLASVPSGGG ASAAESKKEE KKEEKEESDD DMGFSLFE
Arabidopsis Description
RPP2BAT2G27710 protein [Source:UniProtKB/TrEMBL;Acc:B9DGN3]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.