Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G290200.1 | Wheat | cytosol | 43.07 | 77.68 |
| TraesCS7D01G384000.1 | Wheat | cytosol | 41.09 | 74.11 |
| Os07t0470300-00 | Rice | cytosol | 33.66 | 62.39 |
| Os07t0251301-00 | Rice | cytosol | 33.66 | 61.82 |
| Os08t0250300-00 | Rice | cytosol | 32.18 | 57.02 |
| HORVU1Hr1G073640.1 | Barley | cytosol | 27.23 | 48.67 |
| GSMUA_Achr3P31180_001 | Banana | plasma membrane | 26.24 | 47.32 |
| GSMUA_Achr7P25500_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 25.25 | 44.35 |
| GSMUA_Achr4P02910_001 | Banana | cytosol | 24.26 | 42.98 |
| HORVU0Hr1G004480.1 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 16.83 | 29.82 |
Protein Annotations
| Gene3D:1.10.10.1410 | MapMan:17.1.2.1.47 | UniProt:A0A287XBP0 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0006414 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | EnsemblPlantsGene:HORVU7Hr1G091910 | EnsemblPlants:HORVU7Hr1G091910.1 | InterPro:IPR038716 | HAMAP:MF_01478 | InterPro:P1/P2_N_sf |
| PFAM:PF00428 | PANTHER:PTHR21141 | PANTHER:PTHR21141:SF38 | InterPro:Ribosomal_L12 | UniParc:UPI000B47B107 | SEG:seg |
Description
No Description!
Coordinates
chrchr7H:-:562498905..562499707
Molecular Weight (calculated)
21993.8 Da
IEP (calculated)
6.299
GRAVY (calculated)
-0.562
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: GIRSCPLARK KKETTAGVQT VSRAPLVRFR HAHESFSRSV SQRARNRNHL FTIYTRPRGQ GRRSSIQVPD PSTPATPTQT RADAFCFEFE MRFVAAYLLA
101: TLGGNQSPTK DDVRAILGSV GAEVEEGKLD ALFKEVEGKD LAELLAAGRE KFAFAPSAGA AMGASPAAAA GDAAAEEKKD KAQEKKEEEE EEEDLDMFSL
201: FD
101: TLGGNQSPTK DDVRAILGSV GAEVEEGKLD ALFKEVEGKD LAELLAAGRE KFAFAPSAGA AMGASPAAAA GDAAAEEKKD KAQEKKEEEE EEEDLDMFSL
201: FD
1: MKVVAAYLLA VLSGKASPTS ADIKTILGSV GAETEDSQIE LLLKEVKGKD LAELIAAGRE KLASVPSGGG ASAAESKKEE KKEEKEESDD DMGFSLFE
Arabidopsis Description
RPP2BAT2G27710 protein [Source:UniProtKB/TrEMBL;Acc:B9DGN3]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.