Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plastid 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0251301-00 | Rice | cytosol | 81.65 | 80.91 |
| Os08t0250300-00 | Rice | cytosol | 63.3 | 60.53 |
| TraesCS7B01G290200.1 | Wheat | cytosol | 61.47 | 59.82 |
| TraesCS7D01G384000.1 | Wheat | cytosol | 60.55 | 58.93 |
| GSMUA_Achr3P31180_001 | Banana | plasma membrane | 41.28 | 40.18 |
| Os01t0191100-01 | Rice | extracellular | 38.53 | 36.84 |
| GSMUA_Achr4P02910_001 | Banana | cytosol | 36.7 | 35.09 |
| GSMUA_Achr7P25500_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 36.7 | 34.78 |
| HORVU7Hr1G091910.1 | Barley | plastid | 62.39 | 33.66 |
| Os05t0445500-01 | Rice | nucleus | 40.37 | 31.65 |
Protein Annotations
| Gene3D:1.10.10.1410 | EntrezGene:107276117 | MapMan:17.1.2.1.47 | UniProt:A3BJK9 | ProteinID:BAT01417.1 | ProteinID:EAZ39748.1 |
| GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0006414 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR038716 | HAMAP:MF_01478 | EnsemblPlantsGene:Os07g0470300 |
| EnsemblPlants:Os07t0470300-00 | InterPro:P1/P2_N_sf | PFAM:PF00428 | PANTHER:PTHR21141 | PANTHER:PTHR21141:SF38 | InterPro:Ribosomal_L12 |
| UniParc:UPI0000F19EC3 | RefSeq:XP_015645635.1 | SEG:seg | : | : | : |
Description
Similar to 60S acidic ribosomal protein P2A. (Os07t0470300-00)
Coordinates
chr7:+:16810993..16811432
Molecular Weight (calculated)
11215.0 Da
IEP (calculated)
3.789
GRAVY (calculated)
-0.045
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MRFVAAYLMA TIGGNASPTK DDVRAILGAV GADIDEDKLG YLFDQVAGKD LAEILAAGSE MLAFGAAPAA AAATAGGAAA AGEKEEEEKV EEKEKEGEDD
101: IVFSLFDDE
101: IVFSLFDDE
1: MKVVAAYLLA VLSGKASPTS ADIKTILGSV GAETEDSQIE LLLKEVKGKD LAELIAAGRE KLASVPSGGG ASAAESKKEE KKEEKEESDD DMGFSLFE
Arabidopsis Description
RPP2BAT2G27710 protein [Source:UniProtKB/TrEMBL;Acc:B9DGN3]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.