Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0470300-00 | Rice | cytosol | 60.53 | 63.3 |
| Os07t0251301-00 | Rice | cytosol | 60.53 | 62.73 |
| TraesCS7D01G384000.1 | Wheat | cytosol | 57.89 | 58.93 |
| TraesCS7B01G290200.1 | Wheat | cytosol | 54.39 | 55.36 |
| GSMUA_Achr3P31180_001 | Banana | plasma membrane | 47.37 | 48.21 |
| Os01t0191100-01 | Rice | extracellular | 45.61 | 45.61 |
| GSMUA_Achr7P25500_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 45.61 | 45.22 |
| GSMUA_Achr4P02910_001 | Banana | cytosol | 44.74 | 44.74 |
| Os05t0445500-01 | Rice | nucleus | 47.37 | 38.85 |
| HORVU7Hr1G091910.1 | Barley | plastid | 57.02 | 32.18 |
Protein Annotations
| Gene3D:1.10.10.1410 | EntrezGene:107275423 | MapMan:17.1.2.1.47 | UniProt:A3BR69 | ProteinID:BAT04559.1 | ncoils:Coil |
| ProteinID:EAZ42058.1 | GO:GO:0002181 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0006414 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0022625 | InterPro:IPR038716 | HAMAP:MF_01478 | EnsemblPlantsGene:Os08g0250300 | EnsemblPlants:Os08t0250300-00 | InterPro:P1/P2_N_sf |
| PFAM:PF00428 | PANTHER:PTHR21141 | PANTHER:PTHR21141:SF38 | InterPro:Ribosomal_L12 | UniParc:UPI0000F19B6E | RefSeq:XP_015649690.1 |
| SEG:seg | : | : | : | : | : |
Description
Similar to predicted protein. (Os08t0250300-00)
Coordinates
chr8:-:9181114..9181517
Molecular Weight (calculated)
11716.6 Da
IEP (calculated)
3.842
GRAVY (calculated)
-0.092
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MRFVSAYLMA YIGGNESPSK DDVRAILGSV GADVDEAKLD LLFEEIAGKD IPELIAAGRE RLALAAPCGG VAAAAAGGQA VAAGGAAAAA EEEAEEEEKK
101: KEEEDDDGLF NLFD
101: KEEEDDDGLF NLFD
001: MKVIAAFLLA KLGGNENPTS NDLKKILESV GAEIDETKID LLFSLIKDHD VTELIAAGRE KMSALSSGGP AVAMVAGGGG GGAASAAEPV AESKKKVEEV
101: KDESSDDAGM MGLFD
101: KDESSDDAGM MGLFD
Arabidopsis Description
RPP2C60S acidic ribosomal protein P2-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH85]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.