Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plastid 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0470300-00 | Rice | cytosol | 80.91 | 81.65 |
| Os08t0250300-00 | Rice | cytosol | 62.73 | 60.53 |
| TraesCS7B01G290200.1 | Wheat | cytosol | 57.27 | 56.25 |
| TraesCS7D01G384000.1 | Wheat | cytosol | 56.36 | 55.36 |
| Os01t0191100-01 | Rice | extracellular | 41.82 | 40.35 |
| GSMUA_Achr3P31180_001 | Banana | plasma membrane | 40.91 | 40.18 |
| GSMUA_Achr7P25500_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 40.0 | 38.26 |
| GSMUA_Achr4P02910_001 | Banana | cytosol | 38.18 | 36.84 |
| HORVU7Hr1G091910.1 | Barley | plastid | 61.82 | 33.66 |
| Os05t0445500-01 | Rice | nucleus | 41.82 | 33.09 |
Protein Annotations
| Gene3D:1.10.10.1410 | EntrezGene:107276117 | MapMan:17.1.2.1.47 | EntrezGene:9268174 | ProteinID:BAC20133.1 | ProteinID:BAH93848.1 |
| ProteinID:BAT00844.1 | ProteinID:BAT01417.1 | ncoils:Coil | ProteinID:EAZ39748.1 | GO:GO:0002181 | GO:GO:0003674 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0006414 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0022625 | InterPro:IPR038716 | HAMAP:MF_01478 |
| EnsemblPlantsGene:Os07g0251301 | EnsemblPlants:Os07t0251301-00 | InterPro:P1/P2_N_sf | PFAM:PF00428 | PANTHER:PTHR21141 | PANTHER:PTHR21141:SF38 |
| UniProt:Q8H3F5 | InterPro:Ribosomal_L12 | UniParc:UPI00000AD81C | RefSeq:XP_015645635.1 | RefSeq:XP_015645926.1 | SEG:seg |
Description
Similar to Ribosomal phosphoprotein P0. (Os07t0251301-00)
Coordinates
chr7:-:8428311..8428643
Molecular Weight (calculated)
11231.0 Da
IEP (calculated)
3.715
GRAVY (calculated)
-0.021
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MRFVAAYLMA TIGGNASPTK DDVRAILGAV GADVDEDKLG YLFDQVAGKD LSEILAAGSE MLAFGGVGAA PAAAATAGGG AAAAGEKEKE EEKVEEEEED
101: DIVFSLFDDE
101: DIVFSLFDDE
1: MKVVAAYLLA VLSGKASPTS ADIKTILGSV GAETEDSQIE LLLKEVKGKD LAELIAAGRE KLASVPSGGG ASAAESKKEE KKEEKEESDD DMGFSLFE
Arabidopsis Description
RPP2BAT2G27710 protein [Source:UniProtKB/TrEMBL;Acc:B9DGN3]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.