Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G291600.1 | Wheat | unclear | 53.51 | 53.98 |
| TraesCS2B01G310300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 53.51 | 53.98 |
| TraesCS2A01G294000.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 53.51 | 53.98 |
| Zm00001d026578_P002 | Maize | plastid | 44.74 | 45.95 |
| EES13065 | Sorghum | extracellular | 44.74 | 45.54 |
| Zm00001d001899_P001 | Maize | plasma membrane | 44.74 | 45.13 |
| Os01t0191100-01 | Rice | extracellular | 43.86 | 43.86 |
| Zm00001d009653_P008 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 44.74 | 42.5 |
| OQU78483 | Sorghum | endoplasmic reticulum, extracellular | 44.74 | 42.5 |
| EES12108 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 40.35 | 41.07 |
| Solyc11g067100.1.1 | Tomato | nucleus | 38.6 | 38.94 |
| PGSC0003DMT400019150 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 38.6 | 37.93 |
| PGSC0003DMT400030564 | Potato | extracellular | 36.84 | 37.84 |
| VIT_13s0074g00750.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 37.72 | 37.39 |
| HORVU1Hr1G073640.1 | Barley | cytosol | 36.84 | 37.17 |
| VIT_08s0007g03620.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 36.84 | 36.84 |
| PGSC0003DMT400029096 | Potato | cytosol | 35.96 | 36.61 |
| Solyc07g007880.1.1 | Tomato | cytosol | 35.96 | 36.61 |
| GSMUA_Achr10P... | Banana | plasma membrane | 35.09 | 34.48 |
| KRH30835 | Soybean | endoplasmic reticulum | 34.21 | 34.21 |
| PGSC0003DMT400085198 | Potato | cytosol, plastid | 35.09 | 33.9 |
| VIT_10s0042g01190.t01 | Wine grape | extracellular | 33.33 | 33.63 |
| KRH32679 | Soybean | endoplasmic reticulum | 33.33 | 33.33 |
| AT5G40040.1 | Thale cress | cytosol | 32.46 | 32.46 |
| VIT_18s0076g00370.t01 | Wine grape | cytosol | 28.07 | 32.32 |
| AT3G28500.1 | Thale cress | cytosol | 32.46 | 32.17 |
| CDY00130 | Canola | cytosol | 31.58 | 31.86 |
| CDX86428 | Canola | cytosol | 29.82 | 30.09 |
| Bra025339.1-P | Field mustard | cytosol | 29.82 | 30.09 |
| CDY47246 | Canola | extracellular | 29.82 | 29.82 |
| Bra033049.1-P | Field mustard | cytosol | 29.82 | 29.82 |
| VIT_06s0061g01600.t01 | Wine grape | cytosol | 37.72 | 29.66 |
| CDX85202 | Canola | extracellular | 28.95 | 29.2 |
| Bra039054.1-P | Field mustard | cytosol | 28.95 | 29.2 |
| CDY04023 | Canola | cytosol | 28.07 | 28.32 |
| Solyc06g074430.2.1 | Tomato | nucleus, unclear | 36.84 | 27.1 |
| GSMUA_Achr6P07520_001 | Banana | cytosol | 21.93 | 26.6 |
| Zm00001d009652_P003 | Maize | mitochondrion | 44.74 | 20.16 |
| Zm00001d009657_P001 | Maize | cytosol, mitochondrion | 43.86 | 17.79 |
| HORVU7Hr1G091910.1 | Barley | plastid | 29.82 | 16.83 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G004480.1 | EnsemblPlantsGene:HORVU0Hr1G004480 | Gene3D:1.10.10.1410 | InterPro:IPR038716 | InterPro:P1/P2_N_sf | ncoils:Coil |
| PANTHER:PTHR21141 | PANTHER:PTHR21141:SF75 | PFAM:PF00428 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI000B471922 |
| UniProt:A0A287DVN8 | MapMan:17.1.2.1.47 | : | : | : | : |
Description
No Description!
Coordinates
chrchrUn:+:25719062..25719951
Molecular Weight (calculated)
8772.8 Da
IEP (calculated)
5.650
GRAVY (calculated)
-0.049
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKFIAAYLL AYLSGNASPS AEDLTSILES VGCEIDNEKM ELMLCQVKGK DITELLAAGR EKXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXSQVV
101: MPPPPHLRSR CHPP
101: MPPPPHLRSR CHPP
001: MKVVAAYLLA KLSGNENPSV ADLKKIVESV GAEIDQEKID LFFSLIKDRD VTELIAVGRE KMAALSSGGG AVAVASGGGG GAAPAAEPAS VESKKKEEEK
101: EESEDDGGMM SLFD
101: EESEDDGGMM SLFD
Arabidopsis Description
RPP2E60S acidic ribosomal protein P2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUK2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.