Factsheet for Zm00001d009657_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d001899_P001	Maize	plasma membrane	37.37	92.92
EES13065	Sorghum	extracellular	37.01	92.86
Zm00001d026578_P002	Maize	plastid	35.94	90.99
Zm00001d009653_P008	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.72	88.33
TraesCS2D01G291600.1	Wheat	unclear	32.38	80.53
TraesCS2B01G310300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.38	80.53
TraesCS2A01G294000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.38	80.53
Os01t0191100-01	Rice	extracellular	32.38	79.82
GSMUA_Achr10P...	Banana	plasma membrane	29.54	71.55
Solyc11g067100.1.1	Tomato	nucleus	28.47	70.8
PGSC0003DMT400030564	Potato	extracellular	26.69	67.57
VIT_08s0007g03620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.4	67.54
KRH30835	Soybean	endoplasmic reticulum	27.4	67.54
KRH32679	Soybean	endoplasmic reticulum	27.4	67.54
GSMUA_Achr6P07520_001	Banana	cytosol	22.42	67.02
PGSC0003DMT400019150	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.4	66.38
VIT_13s0074g00750.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	25.27	61.74
PGSC0003DMT400029096	Potato	cytosol	23.84	59.82
VIT_10s0042g01190.t01	Wine grape	extracellular	23.84	59.29
AT5G40040.1	Thale cress	cytosol	22.06	54.39
VIT_06s0061g01600.t01	Wine grape	cytosol	27.76	53.79
VIT_18s0076g00370.t01	Wine grape	cytosol	18.51	52.53
Solyc06g074430.2.1	Tomato	nucleus, unclear	28.47	51.61
CDY04023	Canola	cytosol	20.64	51.33
CDY00130	Canola	cytosol	20.64	51.33
Bra039054.1-P	Field mustard	cytosol	20.64	51.33
CDX86428	Canola	cytosol	20.28	50.44
Bra025339.1-P	Field mustard	cytosol	20.28	50.44
AT3G28500.1	Thale cress	cytosol	20.64	50.43
CDX85202	Canola	extracellular	19.93	49.56
CDY47246	Canola	extracellular	19.22	47.37
Bra033049.1-P	Field mustard	cytosol	19.22	47.37
Solyc07g007880.1.1	Tomato	cytosol	18.86	47.32
Zm00001d009652_P003	Maize	mitochondrion	40.93	45.45
PGSC0003DMT400085198	Potato	cytosol, plastid	18.86	44.92
Zm00001d010128_P003	Maize	cytosol	25.98	44.24
HORVU0Hr1G004480.1	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	17.79	43.86

Protein Annotations

Gene3D:1.10.10.1410	EntrezGene:100194313	MapMan:17.1.2.1.47	UniProt:A0A1D6FKZ4	ProteinID:AQK92371.1	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0006414	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	GO:GO:0030529	InterPro:IPR038716	HAMAP:MF_01478	InterPro:MIZ1-like_pln
InterPro:P1/P2_N_sf	PFAM:PF00428	PFAM:PF04759	PANTHER:PTHR21141	PANTHER:PTHR21141:SF76	InterPro:Ribosomal_L12
UniParc:UPI000842DF55	EnsemblPlantsGene:Zm00001d009657	EnsemblPlants:Zm00001d009657_P001	EnsemblPlants:Zm00001d009657_T001	SEG:seg	:

Description

60S acidic ribosomal protein P2-5

Coordinates

chr8:+:74879413..74913123

Molecular Weight (calculated)

30126.8 Da

IEP (calculated)

5.479

GRAVY (calculated)

-0.259

Length

281 amino acids

Sequence
(BLAST)

001: MRSITARNSH DSLSISRRYF KWPVLGKSKS HDDTTFCKDE EYMKSSKAEE EDESTMAFSS ACPSFHSDGF SVSPLLKAAS APHQPPALPP PQRRRKVDPR
101: ACPAMLLESA APTAVLVREM ASSLVRIVLE CERAKGPPST TGSRRRLVEE TVFAVDRVLG AHNRFKVLWM KVVAAYLLAV LAGNASPSAE DLTGILESVG
201: CEVDNERMEL LLSQLSGKDI TELIAAGREK FASVPCGGGG VAVAAGAPAA GGAAPAAEAK KEEKVEEKEE SDDDMGFSLF D

Best Arabidopsis Sequence Match ( AT3G44590.1 )
(BLAST)

001: MKVAAAFLLA VLGGNANPSA DNIKDIIGAV GADVDGESIE LLLKEVSGKD IAELIASGRE KLASVPSGGG VAVSAAPSSG GGGAAAPAEK KEAKKEEKEE
101: SDDDMGFSLF E

Arabidopsis Description

RPP2DAcidic ribosomal protein P2-like [Source:UniProtKB/TrEMBL;Acc:Q0WRF9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.