Factsheet for Zm00001d009653_P008

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d001899_P001	Maize	plasma membrane	89.17	94.69
EES13065	Sorghum	extracellular	88.33	94.64
Zm00001d026578_P002	Maize	plastid	85.83	92.79
TraesCS2A01G294000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	76.67	81.42
TraesCS2D01G291600.1	Wheat	unclear	76.67	81.42
TraesCS2B01G310300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	76.67	81.42
Os01t0191100-01	Rice	extracellular	76.67	80.7
GSMUA_Achr10P...	Banana	plasma membrane	68.33	70.69
Solyc11g067100.1.1	Tomato	nucleus	64.17	68.14
GSMUA_Achr6P07520_001	Banana	cytosol	52.5	67.02
KRH30835	Soybean	endoplasmic reticulum	63.33	66.67
KRH32679	Soybean	endoplasmic reticulum	63.33	66.67
VIT_08s0007g03620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.67	64.91
PGSC0003DMT400030564	Potato	extracellular	60.0	64.86
PGSC0003DMT400019150	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.67	63.79
VIT_13s0074g00750.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	59.17	61.74
PGSC0003DMT400029096	Potato	cytosol	55.83	59.82
VIT_10s0042g01190.t01	Wine grape	extracellular	55.83	59.29
AT5G40040.1	Thale cress	cytosol	50.0	52.63
VIT_18s0076g00370.t01	Wine grape	cytosol	43.33	52.53
Bra039054.1-P	Field mustard	cytosol	47.5	50.44
CDY00130	Canola	cytosol	47.5	50.44
AT3G28500.1	Thale cress	cytosol	48.33	50.43
VIT_06s0061g01600.t01	Wine grape	cytosol	60.83	50.34
Solyc06g074430.2.1	Tomato	nucleus, unclear	63.33	49.03
CDY04023	Canola	cytosol	45.83	48.67
CDX86428	Canola	cytosol	45.83	48.67
Bra025339.1-P	Field mustard	cytosol	45.83	48.67
Solyc07g007880.1.1	Tomato	cytosol	45.0	48.21
CDX85202	Canola	extracellular	45.0	47.79
Bra033049.1-P	Field mustard	cytosol	44.17	46.49
CDY47246	Canola	extracellular	44.17	46.49
PGSC0003DMT400085198	Potato	cytosol, plastid	44.17	44.92
HORVU0Hr1G004480.1	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.5	44.74
Zm00001d010128_P003	Maize	cytosol	60.83	44.24
Zm00001d009652_P003	Maize	mitochondrion	85.83	40.71
Zm00001d009657_P001	Maize	cytosol, mitochondrion	88.33	37.72

Protein Annotations

Gene3D:1.10.10.1410	MapMan:17.1.2.1.47	EntrezGene:542323	UniProt:A0A1D6FKZ1	ProteinID:AQK92364.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0006414	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529	InterPro:IPR038716	HAMAP:MF_01478
InterPro:P1/P2_N_sf	PFAM:PF00428	PANTHER:PTHR21141	PANTHER:PTHR21141:SF76	InterPro:Ribosomal_L12	SignalP:SignalP-noTM
UniParc:UPI0008447104	EnsemblPlantsGene:Zm00001d009653	EnsemblPlants:Zm00001d009653_P008	EnsemblPlants:Zm00001d009653_T008	SEG:seg	:

Description

acidic ribosomal protein P2a60S acidic ribosomal protein P2A

Coordinates

chr8:+:74612694..74614857

Molecular Weight (calculated)

12273.5 Da

IEP (calculated)

3.962

GRAVY (calculated)

0.128

Length

120 amino acids

Sequence
(BLAST)

001: MIFDGLSRMK FVAAYLLAVL AGNASPSADD LTAILESVGC EVDNEKMELL LSQLSGKDIT ELIAAGREKF ASVPCGGGGV AVAAAAPAAG GAASAAEAKK
101: EEKVEEKEES DDDMGFSLFD

Best Arabidopsis Sequence Match ( AT3G44590.1 )
(BLAST)

001: MKVAAAFLLA VLGGNANPSA DNIKDIIGAV GADVDGESIE LLLKEVSGKD IAELIASGRE KLASVPSGGG VAVSAAPSSG GGGAAAPAEK KEAKKEEKEE
101: SDDDMGFSLF E

Arabidopsis Description

RPP2DAcidic ribosomal protein P2-like [Source:UniProtKB/TrEMBL;Acc:Q0WRF9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.