CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d001899_P001	Maize	plasma membrane	94.64	93.81
OQU78483	Sorghum	endoplasmic reticulum, extracellular	96.43	90.0
Zm00001d009653_P008	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	94.64	88.33
EES12108	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	83.93	83.93
TraesCS2A01G294000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	83.04	82.3
TraesCS2D01G291600.1	Wheat	unclear	83.04	82.3
TraesCS2B01G310300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	83.04	82.3
Os01t0191100-01	Rice	extracellular	83.04	81.58
GSMUA_Achr10P...	Banana	plasma membrane	75.0	72.41
Solyc11g067100.1.1	Tomato	nucleus	71.43	70.8
GSMUA_Achr6P07520_001	Banana	cytosol	57.14	68.09
VIT_08s0007g03620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.75	67.54
KRH30835	Soybean	endoplasmic reticulum	67.86	66.67
KRH32679	Soybean	endoplasmic reticulum	67.86	66.67
PGSC0003DMT400030564	Potato	extracellular	66.07	66.67
PGSC0003DMT400019150	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.75	66.38
VIT_13s0074g00750.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.18	63.48
PGSC0003DMT400029096	Potato	cytosol	62.5	62.5
VIT_10s0042g01190.t01	Wine grape	extracellular	60.71	60.18
KXG22113	Sorghum	endoplasmic reticulum, extracellular, plastid	72.32	55.86
VIT_06s0061g01600.t01	Wine grape	cytosol	68.75	53.1
AT5G40040.1	Thale cress	cytosol	53.57	52.63
VIT_18s0076g00370.t01	Wine grape	cytosol	46.43	52.53
CDY00130	Canola	cytosol	51.79	51.33
AT3G28500.1	Thale cress	cytosol	52.68	51.3
Solyc06g074430.2.1	Tomato	nucleus, unclear	70.54	50.97
Bra039054.1-P	Field mustard	cytosol	50.89	50.44
CDY04023	Canola	cytosol	50.0	49.56
CDX86428	Canola	cytosol	50.0	49.56
Bra025339.1-P	Field mustard	cytosol	50.0	49.56
Solyc07g007880.1.1	Tomato	cytosol	49.11	49.11
CDX85202	Canola	extracellular	49.11	48.67
PGSC0003DMT400085198	Potato	cytosol, plastid	49.11	46.61
CDY47246	Canola	extracellular	47.32	46.49
Bra033049.1-P	Field mustard	cytosol	47.32	46.49
HORVU0Hr1G004480.1	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.54	44.74
Zm00001d009652_P003	Maize	mitochondrion	89.29	39.53
Zm00001d009657_P001	Maize	cytosol, mitochondrion	92.86	37.01

Protein Annotations

Gene3D:1.10.10.1410	MapMan:17.1.2.1.47	EntrezGene:8082583	UniProt:C5YA36	EnsemblPlants:EES13065	ProteinID:EES13065
ProteinID:EES13065.1	GO:GO:0002181	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412
GO:GO:0006414	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
GO:GO:0022625	GO:GO:0030529	InterPro:IPR038716	HAMAP:MF_01478	InterPro:P1/P2_N_sf	PFAM:PF00428
PANTHER:PTHR21141	PANTHER:PTHR21141:SF76	InterPro:Ribosomal_L12	EnsemblPlantsGene:SORBI_3006G260400	unigene:Sbi.21251	SignalP:SignalP-noTM
UniParc:UPI0001A8755E	RefSeq:XP_002448737.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:59567707..59570012

Molecular Weight (calculated)

11389.5 Da

IEP (calculated)

3.934

GRAVY (calculated)

0.120

Length

112 amino acids

Sequence
(BLAST)

001: MKFIAAYLLA VLGGNLSPSA EDLAAILESV GCEVDNEKME LLLSQLSGKD ITELIAAGRE KFASVPCGGG GVAVAAAAPA AGGAAPAAEA KKEEKVEEKE
101: ESDDDMGFSL FD

Best Arabidopsis Sequence Match ( AT3G44590.2 )
(BLAST)

001: MKVAAAFLLA VLGGNANPSA DNIKDIIGAV GADVDGESIE LLLKEVSGKD IAELIASGRE KLASVPSGGG VAVSAAPSSG GGGAAAPAEK KEAKKEEKEE
101: SDDDMGFSLF E

Arabidopsis Description

RPP2DAcidic ribosomal protein P2-like [Source:UniProtKB/TrEMBL;Acc:Q0WRF9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.