CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13065	Sorghum	extracellular	90.0	96.43
Zm00001d026578_P002	Maize	plastid	86.67	93.69
EES12108	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.33	83.93
Os01t0191100-01	Rice	extracellular	79.17	83.33
TraesCS2D01G291600.1	Wheat	unclear	77.5	82.3
TraesCS2B01G310300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	77.5	82.3
TraesCS2A01G294000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	77.5	82.3
Solyc11g067100.1.1	Tomato	nucleus	66.67	70.8
GSMUA_Achr10P...	Banana	plasma membrane	68.33	70.69
VIT_08s0007g03620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.17	67.54
GSMUA_Achr6P07520_001	Banana	cytosol	52.5	67.02
PGSC0003DMT400030564	Potato	extracellular	61.67	66.67
KRH30835	Soybean	endoplasmic reticulum	63.33	66.67
KRH32679	Soybean	endoplasmic reticulum	63.33	66.67
PGSC0003DMT400019150	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.17	66.38
VIT_13s0074g00750.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.0	62.61
PGSC0003DMT400029096	Potato	cytosol	56.67	60.71
VIT_10s0042g01190.t01	Wine grape	extracellular	55.83	59.29
KXG22113	Sorghum	endoplasmic reticulum, extracellular, plastid	67.5	55.86
VIT_06s0061g01600.t01	Wine grape	cytosol	64.17	53.1
VIT_18s0076g00370.t01	Wine grape	cytosol	43.33	52.53
AT5G40040.1	Thale cress	cytosol	49.17	51.75
Solyc06g074430.2.1	Tomato	nucleus, unclear	66.67	51.61
CDY04023	Canola	cytosol	47.5	50.44
AT3G28500.1	Thale cress	cytosol	47.5	49.57
CDY00130	Canola	cytosol	46.67	49.56
CDX86428	Canola	cytosol	46.67	49.56
Bra025339.1-P	Field mustard	cytosol	46.67	49.56
CDX85202	Canola	extracellular	45.83	48.67
Bra039054.1-P	Field mustard	cytosol	45.83	48.67
Solyc07g007880.1.1	Tomato	cytosol	45.0	48.21
CDY47246	Canola	extracellular	44.17	46.49
Bra033049.1-P	Field mustard	cytosol	44.17	46.49
PGSC0003DMT400085198	Potato	cytosol, plastid	45.0	45.76
HORVU0Hr1G004480.1	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.5	44.74

Protein Annotations

Gene3D:1.10.10.1410	MapMan:17.1.2.1.47	UniProt:A0A1Z5R3Y1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0006414	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
GO:GO:0030529	InterPro:IPR038716	HAMAP:MF_01478	EnsemblPlants:OQU78483	ProteinID:OQU78483	ProteinID:OQU78483.1
InterPro:P1/P2_N_sf	PFAM:PF00428	PANTHER:PTHR21141	PANTHER:PTHR21141:SF76	InterPro:Ribosomal_L12	EnsemblPlantsGene:SORBI_3009G242300
SignalP:SignalP-noTM	UniParc:UPI000B8BA012	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:57899419..57900289

Molecular Weight (calculated)

12311.6 Da

IEP (calculated)

3.971

GRAVY (calculated)

0.095

Length

120 amino acids

Sequence
(BLAST)

001: MISDGLCRMK FIAAYLLAVL AGNSSPSAED LTAILESVGC EVDNERMELL LSQLSGKDIT ELIAAGREKF ASVPCGGGGV AVAAAAPAAG GAAPAAEAKK
101: EEKVEEKEES DDDMGFSLFD

Best Arabidopsis Sequence Match ( AT3G44590.2 )
(BLAST)

001: MKVAAAFLLA VLGGNANPSA DNIKDIIGAV GADVDGESIE LLLKEVSGKD IAELIASGRE KLASVPSGGG VAVSAAPSSG GGGAAAPAEK KEAKKEEKEE
101: SDDDMGFSLF E

Arabidopsis Description

RPP2DAcidic ribosomal protein P2-like [Source:UniProtKB/TrEMBL;Acc:Q0WRF9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.