Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0074g00750.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 84.07 | 82.61 |
| VIT_08s0007g03620.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 72.57 | 71.93 |
| PGSC0003DMT400030564 | Potato | extracellular | 68.14 | 69.37 |
| Solyc11g067100.1.1 | Tomato | nucleus | 69.03 | 69.03 |
| PGSC0003DMT400019150 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 69.03 | 67.24 |
| KRH32679 | Soybean | endoplasmic reticulum | 67.26 | 66.67 |
| VIT_18s0076g00370.t01 | Wine grape | cytosol | 57.52 | 65.66 |
| KRH30835 | Soybean | endoplasmic reticulum | 64.6 | 64.04 |
| EES13065 | Sorghum | extracellular | 60.18 | 60.71 |
| GSMUA_Achr10P... | Banana | plasma membrane | 61.95 | 60.34 |
| PGSC0003DMT400029096 | Potato | cytosol | 59.29 | 59.82 |
| Zm00001d026578_P002 | Maize | plastid | 58.41 | 59.46 |
| EES12108 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 58.41 | 58.93 |
| VIT_06s0061g01600.t01 | Wine grape | cytosol | 75.22 | 58.62 |
| Zm00001d001899_P001 | Maize | plasma membrane | 58.41 | 58.41 |
| TraesCS2D01G291600.1 | Wheat | unclear | 58.41 | 58.41 |
| TraesCS2B01G310300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 58.41 | 58.41 |
| TraesCS2A01G294000.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 58.41 | 58.41 |
| GSMUA_Achr6P07520_001 | Banana | cytosol | 47.79 | 57.45 |
| Os01t0191100-01 | Rice | extracellular | 57.52 | 57.02 |
| Zm00001d009653_P008 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 59.29 | 55.83 |
| OQU78483 | Sorghum | endoplasmic reticulum, extracellular | 59.29 | 55.83 |
| AT3G28500.1 | Thale cress | cytosol | 53.98 | 53.04 |
| CDY00130 | Canola | cytosol | 51.33 | 51.33 |
| Solyc06g074430.2.1 | Tomato | nucleus, unclear | 69.03 | 50.32 |
| CDY47246 | Canola | extracellular | 50.44 | 50.0 |
| Bra039054.1-P | Field mustard | cytosol | 49.56 | 49.56 |
| Bra033049.1-P | Field mustard | cytosol | 49.56 | 49.12 |
| CDX85202 | Canola | extracellular | 48.67 | 48.67 |
| Solyc07g007880.1.1 | Tomato | cytosol | 47.79 | 48.21 |
| PGSC0003DMT400085198 | Potato | cytosol, plastid | 49.56 | 47.46 |
| CDX86428 | Canola | cytosol | 46.9 | 46.9 |
| Bra025339.1-P | Field mustard | cytosol | 46.9 | 46.9 |
| AT5G40040.1 | Thale cress | cytosol | 46.9 | 46.49 |
| CDY04023 | Canola | cytosol | 46.02 | 46.02 |
| HORVU0Hr1G004480.1 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 33.63 | 33.33 |
| Zm00001d009652_P003 | Maize | mitochondrion | 56.64 | 25.3 |
| Zm00001d009657_P001 | Maize | cytosol, mitochondrion | 59.29 | 23.84 |
Protein Annotations
| Gene3D:1.10.10.1410 | EntrezGene:100257998 | wikigene:100257998 | MapMan:17.1.2.1.47 | EMBL:AM450241 | EMBL:AM489181 |
| ProteinID:CAN61098 | ProteinID:CAN61098.1 | ProteinID:CAN75514 | ProteinID:CAN75514.1 | ProteinID:CBI29067 | ProteinID:CBI29067.3 |
| UniProt:D7TEZ4 | EMBL:FN595766 | GO:GO:0002181 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0006414 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0022625 | GO:GO:0030529 | InterPro:IPR038716 | EntrezGene:LOC100257998 | wikigene:LOC100257998 |
| HAMAP:MF_01478 | InterPro:P1/P2_N_sf | PFAM:PF00428 | PANTHER:PTHR21141 | PANTHER:PTHR21141:SF72 | InterPro:Ribosomal_L12 |
| SignalP:SignalP-noTM | UniParc:UPI00015CB937 | ArrayExpress:VIT_10s0042g01190 | EnsemblPlantsGene:VIT_10s0042g01190 | EnsemblPlants:VIT_10s0042g01190.t01 | RefSeq:XP_002273733 |
| RefSeq:XP_002273733.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr10:+:15163093..15163457
Molecular Weight (calculated)
11389.6 Da
IEP (calculated)
4.109
GRAVY (calculated)
0.145
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVMAAYLLA VLGGYDSLCA DDLKSILGLV GAGADDVGIE LLLFEVKGKD ITELIASGRE KLASVPSGGG AAVATVAASD GGGAAPAATE PRKEKKVEEK
101: EGSDEDMGFG LFD
101: EGSDEDMGFG LFD
001: MKVAAAFLLA VLGGNANPSA DNIKDIIGAV GADVDGESIE LLLKEVSGKD IAELIASGRE KLASVPSGGG VAVSAAPSSG GGGAAAPAEK KEAKKEEKEE
101: SDDDMGFSLF E
101: SDDDMGFSLF E
Arabidopsis Description
RPP2DAcidic ribosomal protein P2-like [Source:UniProtKB/TrEMBL;Acc:Q0WRF9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.