Factsheet for Zm00001d009652_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d001899_P001	Maize	plasma membrane	40.32	90.27
EES13065	Sorghum	extracellular	39.53	89.29
Zm00001d026578_P002	Maize	plastid	38.74	88.29
Zm00001d009653_P008	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.71	85.83
TraesCS2D01G291600.1	Wheat	unclear	34.39	76.99
TraesCS2B01G310300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.39	76.99
TraesCS2A01G294000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.39	76.99
Os01t0191100-01	Rice	extracellular	33.99	75.44
Solyc11g067100.1.1	Tomato	nucleus	30.43	68.14
KRH30835	Soybean	endoplasmic reticulum	29.64	65.79
KRH32679	Soybean	endoplasmic reticulum	29.64	65.79
GSMUA_Achr10P...	Banana	plasma membrane	30.04	65.52
VIT_08s0007g03620.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.25	64.91
PGSC0003DMT400030564	Potato	extracellular	28.46	64.86
PGSC0003DMT400019150	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.25	63.79
GSMUA_Achr6P07520_001	Banana	cytosol	22.53	60.64
VIT_13s0074g00750.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.88	59.13
PGSC0003DMT400029096	Potato	cytosol	25.69	58.04
VIT_10s0042g01190.t01	Wine grape	extracellular	25.3	56.64
AT5G40040.1	Thale cress	cytosol	23.32	51.75
VIT_18s0076g00370.t01	Wine grape	cytosol	20.16	51.52
VIT_06s0061g01600.t01	Wine grape	cytosol	29.25	51.03
Solyc06g074430.2.1	Tomato	nucleus, unclear	31.23	50.97
CDY00130	Canola	cytosol	22.13	49.56
Bra039054.1-P	Field mustard	cytosol	22.13	49.56
CDY04023	Canola	cytosol	21.74	48.67
AT3G28500.1	Thale cress	cytosol	21.74	47.83
CDX86428	Canola	cytosol	21.34	47.79
Bra025339.1-P	Field mustard	cytosol	21.34	47.79
CDX85202	Canola	extracellular	20.95	46.9
Solyc07g007880.1.1	Tomato	cytosol	20.55	46.43
CDY47246	Canola	extracellular	20.55	45.61
Bra033049.1-P	Field mustard	cytosol	20.55	45.61
PGSC0003DMT400085198	Potato	cytosol, plastid	20.95	44.92
HORVU0Hr1G004480.1	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.16	44.74
Zm00001d009657_P001	Maize	cytosol, mitochondrion	45.45	40.93
Zm00001d010128_P003	Maize	cytosol	26.09	40.0

Protein Annotations

Gene3D:1.10.10.1410	MapMan:17.1.2.1.47	EntrezGene:542337	UniProt:A0A1D6FKX3	ProteinID:AQK92351.1	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0006414	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019538	GO:GO:0030529	InterPro:IPR038716
HAMAP:MF_01478	InterPro:P1/P2_N_sf	PFAM:PF00428	PANTHER:PTHR21141	PANTHER:PTHR21141:SF76	InterPro:Ribosomal_L12
TMHMM:TMhelix	UniParc:UPI000844D003	EnsemblPlantsGene:Zm00001d009652	EnsemblPlants:Zm00001d009652_P003	EnsemblPlants:Zm00001d009652_T003	SEG:seg

Description

acidic ribosomal protein P2a-2 acidic ribosomal protein P2a-2

Coordinates

chr8:+:74458043..74460428

Molecular Weight (calculated)

27159.6 Da

IEP (calculated)

4.938

GRAVY (calculated)

0.047

Length

253 amino acids

Sequence
(BLAST)

001: MSFRLLDCSR YSQLTGSSEH LRRALLRFAL VHERACLLVV VCSTHSPSKF GVFTVDTGLY ALLFGCPLSL LVFFLVLQMK FVAAYLLAVL AGNASPSAED
101: LTAILESVGC EVDNERMELL LSQLSGKDIT ELIAAGREKF ASVPCGGGGV AVAAASPAAG GAAPTAEAKK EEKVEEKEES DDILGRPWHT SPRPRPGARL
201: PPPFTDLDLK EAKELVEKAS AVLKDGVEGW SLEGSGREYC REDVGGRHEI VLE

Best Arabidopsis Sequence Match ( AT3G44590.1 )
(BLAST)

001: MKVAAAFLLA VLGGNANPSA DNIKDIIGAV GADVDGESIE LLLKEVSGKD IAELIASGRE KLASVPSGGG VAVSAAPSSG GGGAAAPAEK KEAKKEEKEE
101: SDDDMGFSLF E

Arabidopsis Description

RPP2DAcidic ribosomal protein P2-like [Source:UniProtKB/TrEMBL;Acc:Q0WRF9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.