Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G291600.1 | Wheat | unclear | 100.0 | 100.0 |
| TraesCS2B01G310300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 100.0 | 100.0 |
| EES13065 | Sorghum | extracellular | 82.3 | 83.04 |
| Zm00001d026578_P002 | Maize | plastid | 80.53 | 81.98 |
| Zm00001d001899_P001 | Maize | plasma membrane | 81.42 | 81.42 |
| Os01t0191100-01 | Rice | extracellular | 80.53 | 79.82 |
| EES12108 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 77.88 | 78.57 |
| OQU78483 | Sorghum | endoplasmic reticulum, extracellular | 82.3 | 77.5 |
| Zm00001d009653_P008 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 81.42 | 76.67 |
| TraesCS1A01G277500.1 | Wheat | nucleus | 75.22 | 75.22 |
| Solyc11g067100.1.1 | Tomato | nucleus | 69.03 | 69.03 |
| GSMUA_Achr10P... | Banana | plasma membrane | 69.91 | 68.1 |
| PGSC0003DMT400030564 | Potato | extracellular | 64.6 | 65.77 |
| KRH32679 | Soybean | endoplasmic reticulum | 64.6 | 64.04 |
| KRH30835 | Soybean | endoplasmic reticulum | 64.6 | 64.04 |
| PGSC0003DMT400019150 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 65.49 | 63.79 |
| VIT_08s0007g03620.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 63.72 | 63.16 |
| GSMUA_Achr6P07520_001 | Banana | cytosol | 52.21 | 62.77 |
| VIT_13s0074g00750.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 63.72 | 62.61 |
| PGSC0003DMT400029096 | Potato | cytosol | 59.29 | 59.82 |
| VIT_10s0042g01190.t01 | Wine grape | extracellular | 58.41 | 58.41 |
| AT5G40040.1 | Thale cress | cytosol | 55.75 | 55.26 |
| CDY00130 | Canola | cytosol | 54.87 | 54.87 |
| VIT_18s0076g00370.t01 | Wine grape | cytosol | 46.9 | 53.54 |
| HORVU0Hr1G004480.1 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 53.98 | 53.51 |
| Bra025339.1-P | Field mustard | cytosol | 53.1 | 53.1 |
| CDX86428 | Canola | cytosol | 53.1 | 53.1 |
| CDX85202 | Canola | extracellular | 52.21 | 52.21 |
| Bra039054.1-P | Field mustard | cytosol | 52.21 | 52.21 |
| VIT_06s0061g01600.t01 | Wine grape | cytosol | 66.37 | 51.72 |
| CDY04023 | Canola | cytosol | 51.33 | 51.33 |
| AT3G28500.1 | Thale cress | cytosol | 52.21 | 51.3 |
| CDY47246 | Canola | extracellular | 48.67 | 48.25 |
| Bra033049.1-P | Field mustard | cytosol | 47.79 | 47.37 |
| Solyc06g074430.2.1 | Tomato | nucleus, unclear | 64.6 | 47.1 |
| Solyc07g007880.1.1 | Tomato | cytosol | 45.13 | 45.54 |
| PGSC0003DMT400085198 | Potato | cytosol, plastid | 46.9 | 44.92 |
| Zm00001d009652_P003 | Maize | mitochondrion | 76.99 | 34.39 |
| Zm00001d009657_P001 | Maize | cytosol, mitochondrion | 80.53 | 32.38 |
Protein Annotations
| Gene3D:1.10.10.1410 | MapMan:17.1.2.1.47 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0006414 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR038716 |
| HAMAP:MF_01478 | InterPro:P1/P2_N_sf | PFAM:PF00428 | PANTHER:PTHR21141 | PANTHER:PTHR21141:SF76 | InterPro:Ribosomal_L12 |
| EnsemblPlantsGene:TraesCS2A01G294000 | EnsemblPlants:TraesCS2A01G294000.1 | TIGR:cd05833 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2A:+:505086402..505087229
Molecular Weight (calculated)
11587.6 Da
IEP (calculated)
4.053
GRAVY (calculated)
-0.009
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MKFIAAYLLA YLSGNASPSA EDLTSILESV GCEIDNEKME LMLSQVKGKD ITELLAAGRE KFAAVPSGGG GVAVSAAAPA AGGAAAPAAE SKKEEKVVEK
101: EESDDDMGFS LFD
101: EESDDDMGFS LFD
1: MKVVAAYLLA VLSGKASPTS ADIKTILGSV GAETEDSQIE LLLKEVKGKD LAELIAAGRE KLASVPSGGG ASAAESKKEE KKEEKEESDD DMGFSLFE
Arabidopsis Description
RPP2BAT2G27710 protein [Source:UniProtKB/TrEMBL;Acc:B9DGN3]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.