Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0044g00510.t01 | Wine grape | nucleus | 31.34 | 45.1 |
| VIT_00s0259g00210.t01 | Wine grape | nucleus | 11.85 | 41.23 |
| VIT_00s0956g00030.t01 | Wine grape | nucleus | 11.85 | 41.23 |
| VIT_18s0072g00670.t01 | Wine grape | nucleus | 35.69 | 40.56 |
| VIT_08s0007g03820.t01 | Wine grape | nucleus | 23.3 | 30.59 |
| VIT_13s0074g00400.t01 | Wine grape | nucleus | 23.16 | 30.3 |
| VIT_14s0030g01860.t01 | Wine grape | plastid | 22.21 | 26.5 |
| VIT_04s0008g01850.t01 | Wine grape | nucleus | 20.71 | 23.57 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100247896 | MapMan:15.5.20 | ProteinID:CCB58333 | ProteinID:CCB58333.1 | UniProt:F6HUB0 |
| EMBL:FN596251 | InterPro:IPR017877 | InterPro:Myb-like_dom | PFAM:PF13837 | PFscan:PS50090 | PANTHER:PTHR21654 |
| PANTHER:PTHR21654:SF13 | InterPro:SANT/Myb | SMART:SM00717 | TIGR:TC60188 | TIGR:TC70236 | UniParc:UPI000210A186 |
| ArrayExpress:VIT_02s0025g03220 | EnsemblPlantsGene:VIT_02s0025g03220 | EnsemblPlants:VIT_02s0025g03220.t01 | unigene:Vvi.11270 | unigene:Vvi.1782 | RefSeq:XP_010660505.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:2746446..2750881
Molecular Weight (calculated)
79668.0 Da
IEP (calculated)
8.456
GRAVY (calculated)
-0.814
Length
734 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQGGSQYGV SSEMTPFAAT TTTTSTRTHV LGGADQQQQQ LKLGDPTLAV AEEASPISSR PPAHSSAGNF DEFLPVGGGL PDEDALAAGD EGDRGGVASG
101: NRWPRQETLA LLKIRSEMDV AFRDATLKGP LWEDVSRKLA ELGYSRSAKK CKEKFENVHK YYKRTKEGRA GRQDGKSYRF FSQLEALHST ATSNVSAAPA
201: TPLTAVIATT TNTTTFPNTN TVSPATNLIV APISIGIGTS NPMPVSSVRI PSASPSTMGA SPMFPPDLSS GMITAPSGSA AATAPAAAPT HTALGISFSS
301: NTSSSSSGSD DDEQEDEDIL QGEPSNADSS RFLRKRKRGS SRGSSNSRRM MDFFESLMKQ VMEKQEVMQQ RFLETIEKRE QDRMIREEAW KRQEMARLSR
401: EHDLMAQERA LSASRDAAII AFLQKITGQT IQLPPPVTIP AVPPPAPPAP VPPPAPPTQH HHHHQPQPQP QQQQQHQHHH HHHQQQHLHH HHQSQSTQVV
501: RHQPPISSEV VMAIPEQQVP PQDISSGGGS LESSSSRWPK TEVLALINLR SGLDSRYQEA GPKGPLWEEI SAGMQQMGYK RSAKRCKEKW ENINKYFKKV
601: KESNKKRPED AKTCPYFHQL DALYRKKLLG STSGSGGSGG STYVNPNRPE EQQQQQPPPQ HESAKLDPIP TPYSQDRGDV PAIMPPPITT SQATESENKN
701: GGSSDEQTNN GGLPGSLFGE GSSTPGGGAK KKTL
101: NRWPRQETLA LLKIRSEMDV AFRDATLKGP LWEDVSRKLA ELGYSRSAKK CKEKFENVHK YYKRTKEGRA GRQDGKSYRF FSQLEALHST ATSNVSAAPA
201: TPLTAVIATT TNTTTFPNTN TVSPATNLIV APISIGIGTS NPMPVSSVRI PSASPSTMGA SPMFPPDLSS GMITAPSGSA AATAPAAAPT HTALGISFSS
301: NTSSSSSGSD DDEQEDEDIL QGEPSNADSS RFLRKRKRGS SRGSSNSRRM MDFFESLMKQ VMEKQEVMQQ RFLETIEKRE QDRMIREEAW KRQEMARLSR
401: EHDLMAQERA LSASRDAAII AFLQKITGQT IQLPPPVTIP AVPPPAPPAP VPPPAPPTQH HHHHQPQPQP QQQQQHQHHH HHHQQQHLHH HHQSQSTQVV
501: RHQPPISSEV VMAIPEQQVP PQDISSGGGS LESSSSRWPK TEVLALINLR SGLDSRYQEA GPKGPLWEEI SAGMQQMGYK RSAKRCKEKW ENINKYFKKV
601: KESNKKRPED AKTCPYFHQL DALYRKKLLG STSGSGGSGG STYVNPNRPE EQQQQQPPPQ HESAKLDPIP TPYSQDRGDV PAIMPPPITT SQATESENKN
701: GGSSDEQTNN GGLPGSLFGE GSSTPGGGAK KKTL
001: MSGNSEGLLE SSGGGVGGSV EEEKDMKMEE TGEGAGSGGN RWPRPETLAL LRIRSEMDKA FRDSTLKAPL WEEISRKMME LGYKRSSKKC KEKFENVYKY
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
Arabidopsis Description
GT-2Trihelix transcription factor GT-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39117]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.