Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P04610_001 | Banana | nucleus | 32.4 | 43.18 |
| Os02t0104500-01 | Rice | nucleus | 29.15 | 39.17 |
| VIT_00s0956g00030.t01 | Wine grape | nucleus | 12.4 | 37.91 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 38.45 | 37.07 |
| VIT_00s0259g00210.t01 | Wine grape | nucleus | 12.09 | 36.97 |
| Zm00001d014938_P001 | Maize | nucleus | 37.05 | 35.99 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.65 | 33.9 |
| EES06104 | Sorghum | nucleus | 38.76 | 33.78 |
| Zm00001d054080_P001 | Maize | nucleus | 37.36 | 33.75 |
| HORVU0Hr1G014900.1 | Barley | nucleus | 36.74 | 33.52 |
| TraesCS6B01G020100.1 | Wheat | nucleus | 38.76 | 32.85 |
| GSMUA_AchrUn_... | Banana | nucleus | 10.85 | 32.71 |
| TraesCS6D01G016300.1 | Wheat | nucleus | 38.29 | 32.63 |
| TraesCS6A01G013200.2 | Wheat | nucleus | 37.98 | 32.54 |
| PGSC0003DMT400080676 | Potato | nucleus | 21.86 | 30.26 |
| VIT_04s0044g00510.t01 | Wine grape | nucleus | 22.02 | 27.84 |
| VIT_18s0072g00670.t01 | Wine grape | nucleus | 23.1 | 23.07 |
| VIT_02s0025g03220.t01 | Wine grape | nucleus | 23.57 | 20.71 |
| VIT_14s0030g01860.t01 | Wine grape | plastid | 19.53 | 20.49 |
| VIT_13s0074g00400.t01 | Wine grape | nucleus | 17.21 | 19.79 |
| Solyc08g061910.2.1 | Tomato | nucleus | 7.6 | 19.6 |
| VIT_08s0007g03820.t01 | Wine grape | nucleus | 16.43 | 18.96 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.31 | 18.77 |
Protein Annotations
| ArrayExpress:VIT_04s0008g01850 | EMBL:FN595231 | EnsemblPlants:VIT_04s0008g01850.t01 | EnsemblPlantsGene:VIT_04s0008g01850 | EntrezGene:100256096 | EntrezGene:LOC100256096 |
| Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF31 | PFAM:PF13837 |
| PFscan:PS50090 | ProteinID:CCB46606 | ProteinID:CCB46606.1 | RefSeq:XP_002279929 | RefSeq:XP_002279929.1 | SEG:seg |
| UniParc:UPI0002109A79 | UniProt:F6H3S3 | wikigene:100256096 | wikigene:LOC100256096 | MapMan:15.5.20 | : |
Description
No Description!
Coordinates
chr4:-:1473586..1475831
Molecular Weight (calculated)
73026.0 Da
IEP (calculated)
5.430
GRAVY (calculated)
-1.193
Length
645 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGDSCSSLF SISTPQKQNQ HHHLHYQHHH HHHHLPPPPP PHQQQKHERQ QQQQQFFQLH PVPFTQQLLQ QQHQFEVFQL QQQQQQQQRR LHQQLRLENE
101: LGRNGGGGGE GVGNGGGGEG GSASLPFFNF KLGLNENSGN REVVMNEEDK EEDGLIGGSE EHIPGNRPNS LEMPQCCWQS QGDGTIKEPF WKPLNAQLFN
201: KNDKETNEDE EKKEEGEGNK KINHGQVLDN DGGKNLGNKY RFFGELEAIC SGAGLGETNQ TGSGSALTGE NMTRNAGLLR PLADPHCSNL GGAAAAIGVD
301: HGSETSIGEE AALRKLQKRK RRRKMKEELN SMAGFFESLV KQLMDHQEGL YRKFLEVVER IDQERMEREE AWRSKQLENF NREAAARAHE QTLASSREVA
401: VVSYLEKITG QSIDLPNKNN TQLHSQRYLP KEPVKINNFS SSNTNSRWPK AEVQALIQVR SRLESRFQEP GLKGPLWEEI SSSMTSMGYQ RSAKRCKEKW
501: ENINKYFRKT KDSAKKRSHQ SKTCPYFHQL DQLYSRTPFY PNPSASTDSG VHNLKGNSEL LDAIIAMNDP NTAQKVAPME SFDGNIDDKS EADQQINHGK
601: EKENHRDIEE GDQDMNNEDE EDDEQDNEED DEEGGGGDGE EEDGD
101: LGRNGGGGGE GVGNGGGGEG GSASLPFFNF KLGLNENSGN REVVMNEEDK EEDGLIGGSE EHIPGNRPNS LEMPQCCWQS QGDGTIKEPF WKPLNAQLFN
201: KNDKETNEDE EKKEEGEGNK KINHGQVLDN DGGKNLGNKY RFFGELEAIC SGAGLGETNQ TGSGSALTGE NMTRNAGLLR PLADPHCSNL GGAAAAIGVD
301: HGSETSIGEE AALRKLQKRK RRRKMKEELN SMAGFFESLV KQLMDHQEGL YRKFLEVVER IDQERMEREE AWRSKQLENF NREAAARAHE QTLASSREVA
401: VVSYLEKITG QSIDLPNKNN TQLHSQRYLP KEPVKINNFS SSNTNSRWPK AEVQALIQVR SRLESRFQEP GLKGPLWEEI SSSMTSMGYQ RSAKRCKEKW
501: ENINKYFRKT KDSAKKRSHQ SKTCPYFHQL DQLYSRTPFY PNPSASTDSG VHNLKGNSEL LDAIIAMNDP NTAQKVAPME SFDGNIDDKS EADQQINHGK
601: EKENHRDIEE GDQDMNNEDE EDDEQDNEED DEEGGGGDGE EEDGD
001: MEQGGGGGGN EVVEEASPIS SRPPANNLEE LMRFSAAADD GGLGGGGGGG GGGSASSSSG NRWPREETLA LLRIRSDMDS TFRDATLKAP LWEHVSRKLL
101: ELGYKRSSKK CKEKFENVQK YYKRTKETRG GRHDGKAYKF FSQLEALNTT PPSSSLDVTP LSVANPILMP SSSSSPFPVF SQPQPQTQTQ PPQTHNVSFT
201: PTPPPLPLPS MGPIFTGVTF SSHSSSTASG MGSDDDDDDM DVDQANIAGS SSRKRKRGNR GGGGKMMELF EGLVRQVMQK QAAMQRSFLE ALEKREQERL
301: DREEAWKRQE MARLAREHEV MSQERAASAS RDAAIISLIQ KITGHTIQLP PSLSSQPPPP YQPPPAVTKR VAEPPLSTAQ SQSQQPIMAI PQQQILPPPP
401: PSHPHAHQPE QKQQQQPQQE MVMSSEQSSL PSSSRWPKAE ILALINLRSG MEPRYQDNVP KGLLWEEIST SMKRMGYNRN AKRCKEKWEN INKYYKKVKE
501: SNKKRPQDAK TCPYFHRLDL LYRNKVLGSG GGSSTSGLPQ DQKQSPVTAM KPPQEGLVNV QQTHGSASTE EEEPIEESPQ GTEKVQTLLF LVKM
101: ELGYKRSSKK CKEKFENVQK YYKRTKETRG GRHDGKAYKF FSQLEALNTT PPSSSLDVTP LSVANPILMP SSSSSPFPVF SQPQPQTQTQ PPQTHNVSFT
201: PTPPPLPLPS MGPIFTGVTF SSHSSSTASG MGSDDDDDDM DVDQANIAGS SSRKRKRGNR GGGGKMMELF EGLVRQVMQK QAAMQRSFLE ALEKREQERL
301: DREEAWKRQE MARLAREHEV MSQERAASAS RDAAIISLIQ KITGHTIQLP PSLSSQPPPP YQPPPAVTKR VAEPPLSTAQ SQSQQPIMAI PQQQILPPPP
401: PSHPHAHQPE QKQQQQPQQE MVMSSEQSSL PSSSRWPKAE ILALINLRSG MEPRYQDNVP KGLLWEEIST SMKRMGYNRN AKRCKEKWEN INKYYKKVKE
501: SNKKRPQDAK TCPYFHRLDL LYRNKVLGSG GGSSTSGLPQ DQKQSPVTAM KPPQEGLVNV QQTHGSASTE EEEPIEESPQ GTEKVQTLLF LVKM
Arabidopsis Description
AT-GTL1GT-2-like 1 [Source:TAIR;Acc:AT1G33240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.