Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 24.17 | 54.67 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 66.74 | 48.28 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.32 | 42.64 |
| Os02t0104500-01 | Rice | nucleus | 40.08 | 40.42 |
| HORVU0Hr1G014900.1 | Barley | nucleus | 47.52 | 32.53 |
| VIT_04s0008g01850.t01 | Wine grape | nucleus | 43.18 | 32.4 |
| Zm00001d014938_P001 | Maize | nucleus | 44.42 | 32.38 |
| Zm00001d054080_P001 | Maize | nucleus | 47.52 | 32.21 |
| TraesCS6B01G020100.1 | Wheat | nucleus | 49.59 | 31.54 |
| TraesCS6D01G016300.1 | Wheat | nucleus | 49.17 | 31.44 |
| EES06104 | Sorghum | nucleus | 47.73 | 31.22 |
| TraesCS6A01G013200.2 | Wheat | nucleus | 48.55 | 31.21 |
| GSMUA_Achr8P11760_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 26.24 | 22.8 |
| PGSC0003DMT400080676 | Potato | nucleus | 20.66 | 21.46 |
| GSMUA_Achr9P18800_001 | Banana | nucleus | 24.59 | 20.62 |
| GSMUA_Achr11P... | Banana | nucleus | 26.45 | 20.03 |
| GSMUA_Achr1P04100_001 | Banana | nucleus | 26.03 | 19.66 |
| GSMUA_Achr2P11910_001 | Banana | nucleus | 25.62 | 19.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.27 | 18.91 |
| GSMUA_Achr4P24780_001 | Banana | nucleus | 25.83 | 18.68 |
| GSMUA_Achr2P00580_001 | Banana | nucleus | 25.83 | 17.83 |
| GSMUA_Achr5P19950_001 | Banana | nucleus, plastid | 23.97 | 17.58 |
| KRH34074 | Soybean | nucleus | 21.07 | 17.56 |
| CDY52482 | Canola | nucleus | 21.9 | 17.49 |
| KRG96954 | Soybean | nucleus | 21.49 | 17.33 |
| Bra009994.1-P | Field mustard | nucleus | 21.69 | 17.21 |
| CDX86194 | Canola | nucleus | 21.69 | 17.21 |
| GSMUA_Achr4P29130_001 | Banana | nucleus | 24.79 | 17.17 |
| KRH68714 | Soybean | nucleus | 21.69 | 16.85 |
| CDY52502 | Canola | nucleus | 20.66 | 16.75 |
| CDY05590 | Canola | nucleus | 20.66 | 16.72 |
| Bra020607.1-P | Field mustard | nucleus | 20.87 | 16.61 |
| AT5G28300.1 | Thale cress | nucleus | 20.45 | 15.99 |
| KRG92655 | Soybean | nucleus | 20.87 | 15.05 |
| GSMUA_Achr8P07630_001 | Banana | nucleus | 11.57 | 14.07 |
| Solyc08g061910.2.1 | Tomato | nucleus | 6.82 | 13.2 |
| GSMUA_Achr8P11770_001 | Banana | nucleus | 2.27 | 6.43 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P04610_001 | EnsemblPlants:GSMUA_Achr7T04610_001 | EnsemblPlantsGene:GSMUA_Achr7G04610_001 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| PANTHER:PTHR21654 | PANTHER:PTHR21654:SF31 | PFAM:PF13837 | PFscan:PS50090 | SEG:seg | UniParc:UPI000294A595 |
| UniProt:M0TEQ1 | MapMan:35.1 | : | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G04610_001]
Coordinates
chr7:-:3474855..3481611
Molecular Weight (calculated)
53483.7 Da
IEP (calculated)
6.057
GRAVY (calculated)
-0.955
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MVCLNYAGFK VNEWPSFLAP AMGFKLAMEE SSGGGSRDGI NDGDAILHGD DGSESRLHHW QRDDESAIKE LSWRPLDIDY INRNNKRCTD KKPECSSGHY
101: SKKSKEVAEC DHVQAAGGSN YKLFSELEAI YKPGGGSNAG GGANQTGSGS ALTGDETPLL HVMVPPGLPA ADRVGGTSET SAGEEAPTKK SSKDGARRRR
201: KRRQRQLSSV AAFFESLVKQ LMDHQEGLHR KFLEAAARAQ ERALASSREA AIVSFNTSRW PKAEVQALIR VRSGLESRFQ EPGLKGPLWE EVSATMTTMG
301: YHRSAKRCKE KWENINKYFR KTKESGKKRP HHAKTCPYFQ QLDQLYSKSL NTNKPHPSAS PPGANAAASN PPGDIKDQPK VNSELLDAIV VPADHQSFRF
401: SDMGPLSFDF NSKGNENKQE PGVSVENNDD EDEDVDQGGG EEEEEGEGES QGEEESLGRR RHQLDQEEEE DLRDSSLFFR RLQA
101: SKKSKEVAEC DHVQAAGGSN YKLFSELEAI YKPGGGSNAG GGANQTGSGS ALTGDETPLL HVMVPPGLPA ADRVGGTSET SAGEEAPTKK SSKDGARRRR
201: KRRQRQLSSV AAFFESLVKQ LMDHQEGLHR KFLEAAARAQ ERALASSREA AIVSFNTSRW PKAEVQALIR VRSGLESRFQ EPGLKGPLWE EVSATMTTMG
301: YHRSAKRCKE KWENINKYFR KTKESGKKRP HHAKTCPYFQ QLDQLYSKSL NTNKPHPSAS PPGANAAASN PPGDIKDQPK VNSELLDAIV VPADHQSFRF
401: SDMGPLSFDF NSKGNENKQE PGVSVENNDD EDEDVDQGGG EEEEEGEGES QGEEESLGRR RHQLDQEEEE DLRDSSLFFR RLQA
001: MSGNSEGLLE SSGGGVGGSV EEEKDMKMEE TGEGAGSGGN RWPRPETLAL LRIRSEMDKA FRDSTLKAPL WEEISRKMME LGYKRSSKKC KEKFENVYKY
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
Arabidopsis Description
GT-2Trihelix transcription factor GT-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39117]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.