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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P11760_001 Banana endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 61.66 70.74
GSMUA_Achr1P04100_001 Banana nucleus 56.49 56.32
GSMUA_Achr9P18800_001 Banana nucleus 49.3 54.59
GSMUA_Achr5P19950_001 Banana nucleus, plastid 52.9 51.21
GSMUA_Achr4P24780_001 Banana nucleus 53.52 51.12
GSMUA_Achr2P11910_001 Banana nucleus 49.3 49.22
GSMUA_Achr4P29130_001 Banana nucleus 51.8 47.35
GSMUA_Achr8P11770_001 Banana nucleus 12.21 45.61
Zm00001d032453_P001 Maize nucleus 53.36 43.49
Zm00001d013849_P001 Maize nucleus 51.49 42.34
GSMUA_Achr2P00580_001 Banana nucleus 46.32 42.23
EER91374 Sorghum nucleus 53.21 42.13
TraesCS1A01G176700.2 Wheat nucleus 53.68 41.98
TraesCS1D01G162400.1 Wheat nucleus, plastid 53.36 41.74
HORVU1Hr1G046940.4 Barley nucleus 53.99 41.67
TraesCS1B01G203300.2 Wheat nucleus 52.74 41.4
KXG40355 Sorghum nucleus, plastid 49.77 40.72
Zm00001d027335_P001 Maize nucleus 49.3 38.94
HORVU4Hr1G089120.1 Barley nucleus, plastid 47.73 38.46
TraesCSU01G029700.1 Wheat nucleus 47.1 38.25
TraesCS4B01G396900.1 Wheat nucleus 41.0 37.86
TraesCS5A01G558200.1 Wheat nucleus, plastid 46.48 37.83
GSMUA_Achr8P07630_001 Banana nucleus 18.47 29.65
GSMUA_Achr7P04610_001 Banana nucleus 20.03 26.45
GSMUA_AchrUn_... Banana nucleus 8.61 25.7
GSMUA_Achr1P24120_001 Banana nucleus 23.79 22.72
GSMUA_AchrUn_... Banana nucleus 19.87 18.19
GSMUA_AchrUn_... Banana nucleus 12.68 17.27
Protein Annotations
EnsemblPlants:GSMUA_Achr11P03520_001EnsemblPlants:GSMUA_Achr11T03520_001EnsemblPlantsGene:GSMUA_Achr11G03520_001Gene3D:1.10.10.60InterPro:IPR017877InterPro:Myb-like_dom
InterPro:SANT/MybPANTHER:PTHR21654PANTHER:PTHR21654:SF48PFAM:PF13837PFscan:PS50090SEG:seg
SMART:SM00717UniParc:UPI000294C070UniProt:M0RP32MapMan:15.5.20::
Description
Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr11G03520_001]
Coordinates
chr11:+:2539263..2542148
Molecular Weight (calculated)
69354.0 Da
IEP (calculated)
5.793
GRAVY (calculated)
-0.960
Length
639 amino acids
Sequence
(BLAST)
001: MQQQQEGGSQ FGGPSSETAG HRVGAFLQPP PLLAEAASPI SSRRPPPEDA AADFDEMGPA VAGGGFPDED AERGGAPGNR WPRQETLALL KIRSEMDAAF
101: RDATIKGPLW EEVSRKLAEL GYERSAKKCK EKFENVHKYY KRKKDGRAGR QDGKTYRFYS ELEALHSTGR GGATTPAAIA ALSPISGGAP PPVTMPTSVV
201: PEHGAQGVSS SAAAAAAAGL GFSSNSSSSS SSESDDADTE EAGGVGKGRK RKHRGSARYR RQMMAFFEGL MKQVMERQEA MQQRFLDAID KREQDRMKRE
301: EAWRLQEMSR LSREQELLVQ ERSMAASRDS AVVSYLQKIS GQSIPLAAAA SIAPRPPQPS EAQEGQGSGS FEPTSSSRWP KAEVHALIDL RSSLESSYQD
401: SGPKGPLWEE ISTGMQRLGY NRSAKRCKEK WENINKYFKK VKEGNRKRPE DSKTCPYFHQ LDALYRKKLL GSSGGGTSSS SVGVKPQQEP ISQEQHQQRP
501: ATKTPGDSGN DNGNSNGGNA EAGEGRDGAQ VQTSEGGHRP TFFEEAMKKP EDIVKEPMER RQRQPVMDDP DKVDEPDSNN LHEDEEDDDD NEDDEDSKMQ
601: YEIQFQRQSV SGGGGGGNAS TTASAAATTA AGSFLAVVQ
Best Arabidopsis Sequence Match ( AT1G76890.2 )
(BLAST)
001: MSGNSEGLLE SSGGGVGGSV EEEKDMKMEE TGEGAGSGGN RWPRPETLAL LRIRSEMDKA FRDSTLKAPL WEEISRKMME LGYKRSSKKC KEKFENVYKY
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
Arabidopsis Description
GT-2Trihelix transcription factor GT-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39117]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.