Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03680.1 | EES01406 | AT3G01090.2 | 25697797 |
| AT5G03680.1 | EES19859 | AT3G01090.2 | 25697797 |
| AT5G03680.1 | EES01406 | AT3G01090.2 | 25697797 |
| AT5G03680.1 | EES19859 | AT3G01090.2 | 25697797 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027335_P001 | Maize | nucleus | 82.2 | 79.36 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 46.61 | 52.6 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 53.14 | 52.33 |
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 52.5 | 52.23 |
| TraesCSU01G029700.1 | Wheat | nucleus | 51.86 | 51.46 |
| GSMUA_Achr8P11760_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 36.24 | 50.81 |
| GSMUA_Achr11P... | Banana | nucleus | 40.72 | 49.77 |
| GSMUA_Achr1P04100_001 | Banana | nucleus | 39.56 | 48.21 |
| EER91374 | Sorghum | nucleus | 49.04 | 47.46 |
| GSMUA_Achr9P18800_001 | Banana | nucleus | 34.96 | 47.31 |
| KRH35148 | Soybean | cytosol, mitochondrion, nucleus | 11.91 | 47.21 |
| GSMUA_Achr4P24780_001 | Banana | nucleus | 39.95 | 46.64 |
| OQU82045 | Sorghum | nucleus, plastid | 42.64 | 44.58 |
| GSMUA_Achr2P11910_001 | Banana | nucleus | 35.85 | 43.75 |
| GSMUA_Achr5P19950_001 | Banana | nucleus, plastid | 36.75 | 43.48 |
| GSMUA_Achr4P29130_001 | Banana | nucleus | 38.16 | 42.63 |
| CDY13568 | Canola | nucleus | 26.38 | 41.78 |
| CDY45957 | Canola | nucleus | 25.86 | 41.39 |
| VIT_04s0044g00510.t01 | Wine grape | nucleus | 27.02 | 41.37 |
| CDY45955 | Canola | nucleus | 23.18 | 41.14 |
| Bra003702.1-P | Field mustard | nucleus | 24.07 | 41.05 |
| Solyc11g005380.1.1 | Tomato | nucleus | 25.99 | 41.01 |
| PGSC0003DMT400010112 | Potato | nucleus | 25.74 | 39.96 |
| KRH53849 | Soybean | nucleus | 25.35 | 39.84 |
| CDX88320 | Canola | nucleus | 27.66 | 39.71 |
| Bra008286.1-P | Field mustard | nucleus | 26.25 | 39.65 |
| KRH38181 | Soybean | nucleus | 24.84 | 39.59 |
| Bra015716.1-P | Field mustard | nucleus | 27.91 | 39.56 |
| Bra008285.1-P | Field mustard | nucleus | 28.04 | 39.46 |
| CDY65284 | Canola | nucleus | 27.91 | 39.35 |
| PGSC0003DMT400061942 | Potato | nucleus | 31.63 | 39.33 |
| KRG91649 | Soybean | nucleus | 32.39 | 39.29 |
| CDY48545 | Canola | nucleus, plastid | 28.3 | 38.91 |
| KRH64101 | Soybean | nucleus | 24.84 | 38.8 |
| CDX68080 | Canola | nucleus | 28.68 | 38.69 |
| GSMUA_Achr2P00580_001 | Banana | nucleus | 34.31 | 38.23 |
| Solyc04g071360.2.1 | Tomato | nucleus | 32.01 | 38.23 |
| EES05815 | Sorghum | nucleus | 35.21 | 38.19 |
| KRH35149 | Soybean | nucleus | 32.52 | 38.08 |
| AT1G76880.1 | Thale cress | nucleus | 29.32 | 37.98 |
| CDY48546 | Canola | nucleus | 20.36 | 37.86 |
| AT1G76890.2 | Thale cress | nucleus | 27.78 | 37.74 |
| VIT_18s0072g00670.t01 | Wine grape | nucleus | 31.11 | 37.62 |
| KRH70308 | Soybean | nucleus | 30.35 | 37.56 |
| KRH08699 | Soybean | nucleus | 31.5 | 37.56 |
| Bra015715.1-P | Field mustard | nucleus | 27.14 | 36.93 |
| Bra003703.1-P | Field mustard | nucleus | 28.81 | 36.7 |
| Solyc12g056510.1.1 | Tomato | nucleus | 30.35 | 36.41 |
| KRH70307 | Soybean | nucleus | 27.53 | 35.89 |
| KRH08698 | Soybean | nucleus | 27.4 | 34.74 |
| KRG91651 | Soybean | nucleus | 27.4 | 33.97 |
| CDX87564 | Canola | nucleus | 17.03 | 31.15 |
| VIT_08s0007g03820.t01 | Wine grape | nucleus | 22.02 | 30.77 |
| KRG96146 | Soybean | nucleus | 21.64 | 29.24 |
| VIT_13s0074g00400.t01 | Wine grape | nucleus | 21.0 | 29.23 |
| KRH67857 | Soybean | nucleus | 21.13 | 28.35 |
| PGSC0003DMT400007016 | Potato | nucleus | 19.08 | 27.49 |
| KRH35147 | Soybean | nucleus | 9.86 | 27.02 |
| Solyc09g009250.2.1 | Tomato | nucleus | 18.57 | 26.7 |
| KRH32666 | Soybean | nucleus | 19.97 | 26.26 |
| Bra005777.1-P | Field mustard | nucleus | 18.95 | 25.83 |
| PGSC0003DMT400072404 | Potato | nucleus | 13.7 | 25.78 |
| AT5G03680.1 | Thale cress | nucleus | 19.46 | 25.72 |
| CDX80883 | Canola | nucleus | 16.65 | 25.49 |
| CDX70293 | Canola | nucleus | 18.57 | 25.39 |
| CDY44379 | Canola | nucleus | 19.08 | 25.3 |
| Bra028824.1-P | Field mustard | nucleus | 19.08 | 25.25 |
| Bra009518.1-P | Field mustard | nucleus | 18.44 | 25.22 |
| CDY11266 | Canola | nucleus | 16.39 | 25.1 |
| CDY10364 | Canola | nucleus | 16.01 | 24.65 |
| CDY04893 | Canola | nucleus | 15.75 | 24.26 |
| AT3G10000.1 | Thale cress | nucleus | 14.6 | 23.7 |
| EES06104 | Sorghum | nucleus | 21.89 | 23.11 |
| KRG92051 | Soybean | nucleus | 15.88 | 23.09 |
| KRH34733 | Soybean | nucleus | 15.88 | 22.88 |
| CDY45956 | Canola | cytosol | 1.92 | 21.13 |
Protein Annotations
| EnsemblPlants:KXG40355 | EnsemblPlantsGene:SORBI_3001G534300 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom | InterPro:SANT/Myb |
| PANTHER:PTHR21654 | PANTHER:PTHR21654:SF48 | PFAM:PF13837 | PFscan:PS50090 | ProteinID:KXG40355 | ProteinID:KXG40355.1 |
| SEG:seg | SMART:SM00717 | UniParc:UPI00081AD518 | UniProt:A0A1B6QR32 | MapMan:15.5.20 | : |
Description
hypothetical protein
Coordinates
chr1:+:79751327..79756004
Molecular Weight (calculated)
82014.4 Da
IEP (calculated)
6.688
GRAVY (calculated)
-0.727
Length
781 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQPAMPPPF SPAAGTVSAA GQHATPISSR PPPEPQQQVD ELGGGSASAG SSFVVDHDGA SAGGGGDDGE RNGPSGGNRW PRQETLALLK IRSEMDAAFR
101: EAALKGPLWE QVARKLEAMG YKRSAKKCRE KFENVDKYYK RTKDGRAGRG DGKAYRFFSE LEALHGASST AAPHPPVSVS LAPTPVAMAL PPPATAALPG
201: MVPAALHAEA QPPTQPRVVA AVPQPAPTAG TGSATATTAP PAGAASDAAA ACMMTPGDVG FSSGSDGEDT EETGGGDGRK RKRDDGDGFG GSSSKMMRFF
301: EGLMRQVMER QEEMQRRFIE AMERREQDRM IREEAWRRQE VARLAREQDA LAQERAMAAS RDAAVVSFIQ RVTGQTIPMP MPSSVAPPSA FITALTHTPP
401: PLQPTPVASA APAQPPPPPA HQLSPTTPKP HTTMPPMTAQ PQPHQAPSNP QGSKEIVVRA PPPAESQDTA GSGGGAPSPS PSRWPKAEVH ALIQLRTELE
501: TRYQDSGPKG PLWEDISSGM RRLGYNRSAK RCKEKWENIN KYFKKVKESN KKRPEDSKTC PYYHQLDALY RSKALASLSS SGAAPAAAAP RPDQQAAAAP
601: PVTVLAAVPL SQTAPHHGNG NGNGCASRGS SDNGGGMQKQ QQASNGGGVA ARFSGAGGNG VAATNKRDEG IIVMTKETTA APEETRPQPV SMNDSYVNDD
701: AVDSDSISSM DDDDDEDDFD DDEEGDVRGG GSGKMQYEIQ FQRQQQNNQS GGGGVRPNGS GGASAGPAAT ASGSFLTMVH H
101: EAALKGPLWE QVARKLEAMG YKRSAKKCRE KFENVDKYYK RTKDGRAGRG DGKAYRFFSE LEALHGASST AAPHPPVSVS LAPTPVAMAL PPPATAALPG
201: MVPAALHAEA QPPTQPRVVA AVPQPAPTAG TGSATATTAP PAGAASDAAA ACMMTPGDVG FSSGSDGEDT EETGGGDGRK RKRDDGDGFG GSSSKMMRFF
301: EGLMRQVMER QEEMQRRFIE AMERREQDRM IREEAWRRQE VARLAREQDA LAQERAMAAS RDAAVVSFIQ RVTGQTIPMP MPSSVAPPSA FITALTHTPP
401: PLQPTPVASA APAQPPPPPA HQLSPTTPKP HTTMPPMTAQ PQPHQAPSNP QGSKEIVVRA PPPAESQDTA GSGGGAPSPS PSRWPKAEVH ALIQLRTELE
501: TRYQDSGPKG PLWEDISSGM RRLGYNRSAK RCKEKWENIN KYFKKVKESN KKRPEDSKTC PYYHQLDALY RSKALASLSS SGAAPAAAAP RPDQQAAAAP
601: PVTVLAAVPL SQTAPHHGNG NGNGCASRGS SDNGGGMQKQ QQASNGGGVA ARFSGAGGNG VAATNKRDEG IIVMTKETTA APEETRPQPV SMNDSYVNDD
701: AVDSDSISSM DDDDDEDDFD DDEEGDVRGG GSGKMQYEIQ FQRQQQNNQS GGGGVRPNGS GGASAGPAAT ASGSFLTMVH H
001: MSGNSEGLLE SSGGGVGGSV EEEKDMKMEE TGEGAGSGGN RWPRPETLAL LRIRSEMDKA FRDSTLKAPL WEEISRKMME LGYKRSSKKC KEKFENVYKY
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
Arabidopsis Description
GT-2Trihelix transcription factor GT-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39117]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.