Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g071360.2.1 | Tomato | nucleus | 96.18 | 92.35 |
| VIT_18s0072g00670.t01 | Wine grape | nucleus | 53.82 | 52.32 |
| PGSC0003DMT400010112 | Potato | nucleus | 34.87 | 43.54 |
| KXG40355 | Sorghum | nucleus, plastid | 39.33 | 31.63 |
| Zm00001d032453_P001 | Maize | nucleus | 38.69 | 30.99 |
| Zm00001d013849_P001 | Maize | nucleus | 37.42 | 30.24 |
| TraesCS1A01G176700.2 | Wheat | nucleus | 39.01 | 29.99 |
| TraesCS1D01G162400.1 | Wheat | nucleus, plastid | 38.85 | 29.87 |
| EER91374 | Sorghum | nucleus | 38.38 | 29.86 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 38.53 | 29.73 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 39.17 | 29.71 |
| TraesCSU01G029700.1 | Wheat | nucleus | 37.1 | 29.61 |
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 36.78 | 29.43 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 37.1 | 29.38 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 31.85 | 28.9 |
| Zm00001d027335_P001 | Maize | nucleus | 37.1 | 28.8 |
| GSMUA_Achr8P11770_001 | Banana | nucleus | 7.01 | 25.73 |
| PGSC0003DMT400034607 | Potato | nucleus | 15.45 | 24.94 |
| PGSC0003DMT400007016 | Potato | nucleus | 21.5 | 24.91 |
| PGSC0003DMT400072404 | Potato | nucleus | 16.24 | 24.58 |
| PGSC0003DMT400080676 | Potato | nucleus | 15.92 | 21.46 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400061942 | EnsemblPlantsGene:PGSC0003DMG400024107 | EntrezGene:102588298 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| InterPro:SANT/Myb | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF19 | PFAM:PF13837 | PFscan:PS50090 | PGSC:PGSC0003DMG400024107 |
| RefSeq:XP_006359818.1 | SEG:seg | SMART:SM00717 | UniParc:UPI0002958F1F | UniProt:M1C8A3 | MapMan:15.5.20 |
Description
GT2 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400024107]
Coordinates
chr4:+:59881127..59884571
Molecular Weight (calculated)
69392.1 Da
IEP (calculated)
6.382
GRAVY (calculated)
-0.900
Length
628 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGVSGIVSS EGGGENPESG GGAGSGGSSE IGLGGGGGGG GGSSGGFMTE DGERNSGGNR WPRQETIALL KIRSEMDVIF RDSSLKGPLW EEVSRKMADL
101: GFHRSSKKCK EKFENVYKYH KRTKDGRASK ADGKNYRFFE QLEALENITS HHSLMPPSNT RPPPPPLEAT PINMAMPMAS SNVQVPASQG TIPHHVTVSS
201: APPPPPNSLF APLPHQNASP VALPQPAVNP IPQQVNASAM SYSTSSSTSS DEDIQRRHKK KRKWKDYFDK FTKDVINKQE ESHRRFLEKL EKREHDRMVR
301: EEAWKLEEMA RMNREHDLLV QERAMAAAKD AAVISFLQKI TEQQNIQIPN SINVGPPSPQ VQIQLPENPL PAPVPTHSPQ IQPTVTAAPA PVPAPVPALL
401: PSLSLPLTPP VPSKNMELVP KSDNGGDSYS PASSSRWPKA EVEALIKLRT NLDVKYQENG PKGPLWEEIS SGMKKIGYNR NAKRCKEKWE NINKYFKKVK
501: ESNKKRPEDS KTCPYFHQLD ALYKEKAKNP ETTSSFNPSF ALNPENNPMA PIMARPEQQW PLPPHHESTT RIDHENESDN MDEDDHDDDD EEDEDDEEEN
601: NAYEIVANKQ QSSMAAANTT TSTATTTV
101: GFHRSSKKCK EKFENVYKYH KRTKDGRASK ADGKNYRFFE QLEALENITS HHSLMPPSNT RPPPPPLEAT PINMAMPMAS SNVQVPASQG TIPHHVTVSS
201: APPPPPNSLF APLPHQNASP VALPQPAVNP IPQQVNASAM SYSTSSSTSS DEDIQRRHKK KRKWKDYFDK FTKDVINKQE ESHRRFLEKL EKREHDRMVR
301: EEAWKLEEMA RMNREHDLLV QERAMAAAKD AAVISFLQKI TEQQNIQIPN SINVGPPSPQ VQIQLPENPL PAPVPTHSPQ IQPTVTAAPA PVPAPVPALL
401: PSLSLPLTPP VPSKNMELVP KSDNGGDSYS PASSSRWPKA EVEALIKLRT NLDVKYQENG PKGPLWEEIS SGMKKIGYNR NAKRCKEKWE NINKYFKKVK
501: ESNKKRPEDS KTCPYFHQLD ALYKEKAKNP ETTSSFNPSF ALNPENNPMA PIMARPEQQW PLPPHHESTT RIDHENESDN MDEDDHDDDD EEDEDDEEEN
601: NAYEIVANKQ QSSMAAANTT TSTATTTV
001: MMQLGGGTPT TTAAATTVTT ATAPPPQSNN NDSAATEAAA AAVGAFEVSE EMHDRGFGGN RWPRQETLAL LKIRSDMGIA FRDASVKGPL WEEVSRKMAE
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6K3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.