Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G081310.4 | nucleus |
| HORVU3Hr1G069190.1 | nucleus |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 87.39 | 88.28 |
| TraesCSU01G029700.1 | Wheat | nucleus | 87.14 | 87.8 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 75.91 | 86.99 |
| KXG40355 | Sorghum | nucleus, plastid | 52.33 | 53.14 |
| Zm00001d027335_P001 | Maize | nucleus | 52.33 | 51.3 |
| GSMUA_Achr8P11760_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 34.93 | 49.73 |
| GSMUA_Achr11P... | Banana | nucleus | 38.46 | 47.73 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 48.3 | 46.26 |
| HORVU6Hr1G025060.1 | Barley | nucleus | 7.31 | 45.67 |
| GSMUA_Achr4P24780_001 | Banana | nucleus | 38.46 | 45.59 |
| GSMUA_Achr1P04100_001 | Banana | nucleus | 36.7 | 45.4 |
| GSMUA_Achr9P18800_001 | Banana | nucleus | 32.91 | 45.23 |
| GSMUA_Achr5P19950_001 | Banana | nucleus, plastid | 37.07 | 44.55 |
| GSMUA_Achr2P11910_001 | Banana | nucleus | 34.55 | 42.81 |
| HORVU2Hr1G092650.3 | Barley | nucleus | 39.47 | 42.18 |
| KRH35148 | Soybean | cytosol, mitochondrion, nucleus | 10.47 | 42.13 |
| Bra015716.1-P | Field mustard | nucleus | 28.75 | 41.38 |
| CDX88320 | Canola | nucleus | 28.37 | 41.36 |
| GSMUA_Achr4P29130_001 | Banana | nucleus | 36.07 | 40.92 |
| CDY45955 | Canola | nucleus | 22.7 | 40.91 |
| VIT_04s0044g00510.t01 | Wine grape | nucleus | 26.1 | 40.59 |
| HORVU6Hr1G061300.6 | Barley | nucleus | 31.78 | 39.81 |
| CDY13568 | Canola | nucleus | 24.72 | 39.76 |
| CDY48545 | Canola | nucleus, plastid | 28.37 | 39.61 |
| CDX68080 | Canola | nucleus | 28.88 | 39.55 |
| CDY45957 | Canola | nucleus | 24.21 | 39.34 |
| Bra008285.1-P | Field mustard | nucleus | 27.36 | 39.1 |
| CDY65284 | Canola | nucleus | 27.11 | 38.81 |
| HORVU6Hr1G025090.1 | Barley | cytosol, nucleus, plastid | 8.83 | 38.67 |
| Bra003702.1-P | Field mustard | nucleus | 22.32 | 38.65 |
| AT1G76880.1 | Thale cress | nucleus | 29.13 | 38.31 |
| KRG91649 | Soybean | nucleus | 30.77 | 37.89 |
| Solyc11g005380.1.1 | Tomato | nucleus | 23.58 | 37.78 |
| VIT_18s0072g00670.t01 | Wine grape | nucleus | 30.64 | 37.62 |
| KRH38181 | Soybean | nucleus | 23.2 | 37.55 |
| Bra003703.1-P | Field mustard | nucleus | 29.0 | 37.52 |
| KRH53849 | Soybean | nucleus | 23.46 | 37.42 |
| Bra008286.1-P | Field mustard | nucleus | 24.34 | 37.33 |
| GSMUA_Achr2P00580_001 | Banana | nucleus | 32.91 | 37.23 |
| PGSC0003DMT400061942 | Potato | nucleus | 29.38 | 37.1 |
| KRH70308 | Soybean | nucleus | 29.38 | 36.93 |
| KRH35149 | Soybean | nucleus | 31.02 | 36.88 |
| KRH64101 | Soybean | nucleus | 23.2 | 36.8 |
| KRH08699 | Soybean | nucleus | 30.39 | 36.79 |
| PGSC0003DMT400010112 | Potato | nucleus | 23.33 | 36.78 |
| Solyc04g071360.2.1 | Tomato | nucleus | 29.38 | 35.63 |
| AT1G76890.2 | Thale cress | nucleus | 25.35 | 34.96 |
| Bra015715.1-P | Field mustard | nucleus | 25.22 | 34.84 |
| Solyc12g056510.1.1 | Tomato | nucleus | 28.25 | 34.41 |
| CDX87564 | Canola | nucleus | 18.29 | 33.96 |
| CDY48546 | Canola | nucleus | 17.91 | 33.81 |
| KRG91651 | Soybean | nucleus | 26.48 | 33.33 |
| KRH70307 | Soybean | nucleus | 24.84 | 32.89 |
| KRH08698 | Soybean | nucleus | 25.35 | 32.63 |
| VIT_13s0074g00400.t01 | Wine grape | nucleus | 21.44 | 30.3 |
| VIT_08s0007g03820.t01 | Wine grape | nucleus | 20.43 | 28.98 |
| KRH35147 | Soybean | nucleus | 10.21 | 28.42 |
| KRG96146 | Soybean | nucleus | 20.68 | 28.37 |
| KRH67857 | Soybean | nucleus | 20.18 | 27.49 |
| PGSC0003DMT400007016 | Potato | nucleus | 18.29 | 26.75 |
| Solyc09g009250.2.1 | Tomato | nucleus | 18.16 | 26.52 |
| PGSC0003DMT400072404 | Potato | nucleus | 13.87 | 26.51 |
| Bra005777.1-P | Field mustard | nucleus | 19.04 | 26.35 |
| AT5G03680.1 | Thale cress | nucleus | 19.55 | 26.23 |
| KRH32666 | Soybean | nucleus | 19.29 | 25.76 |
| CDY11266 | Canola | nucleus | 16.52 | 25.69 |
| CDX80883 | Canola | nucleus | 16.39 | 25.49 |
| Bra028824.1-P | Field mustard | nucleus | 18.79 | 25.25 |
| CDX70293 | Canola | nucleus | 18.16 | 25.22 |
| CDY44379 | Canola | nucleus | 18.66 | 25.13 |
| Bra009518.1-P | Field mustard | nucleus | 18.03 | 25.04 |
| CDY04893 | Canola | nucleus | 15.64 | 24.46 |
| CDY10364 | Canola | nucleus | 15.64 | 24.46 |
| KRH34733 | Soybean | nucleus | 15.76 | 23.06 |
| KRG92051 | Soybean | nucleus | 15.51 | 22.91 |
| AT3G10000.1 | Thale cress | nucleus | 13.87 | 22.87 |
| HORVU0Hr1G014900.1 | Barley | nucleus | 19.67 | 22.07 |
| CDY45956 | Canola | cytosol | 1.39 | 15.49 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G089120.1 | EnsemblPlantsGene:HORVU4Hr1G089120 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom | InterPro:SANT/Myb |
| PANTHER:PTHR21654 | PANTHER:PTHR21654:SF48 | PFAM:PF13837 | PFscan:PS50090 | SEG:seg | SMART:SM00717 |
| UniParc:UPI000B479551 | UniProt:A0A287Q356 | MapMan:15.5.20 | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:641771191..641775630
Molecular Weight (calculated)
85389.3 Da
IEP (calculated)
7.215
GRAVY (calculated)
-0.826
Length
793 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQPPDMPPF SPAGWRGPAG APSPISSRPP APTPAPAPGQ QHQQHQMDEQ HGAAVSGSGS GSVDGGEEGE RGGSSSAAPG GNRWPRQETL ALLKIRSEMD
101: AAFREAALKG PLWEEVSRRL AEMGHTRSAK KCREKFENVD KYYRRTKDGR TGRGDGKTYR FFTELEALHG AHQPPPAAPV SATIVTYSAV PTAPPRVLQA
201: AEPSPPPLFL THQPVPTESP ACLTTTAPVG DASFSDSDGE DTDETADGGK RKRRGGSWGH GGKAMRFFEG LMRQVMERQE AMQSRLLEAI ERRDQDRMIR
301: EEAWRRQEVA RLAREQDALA QERAVAASRD AAVVSFIQRI TGQIVPVQAP SSFPAKPAAT VTSVKPPPLQ PTPVASAAPA PAPPTPRPPV QAQPNVTTPM
401: RTQPQTPQPQ QHVTPTATPE PQPQTPQQQP HHQQSKEIVV HAPEQPPVDM AGGASPSRWP KAEVHALIQL RTEMEARYQD TAPKGPLWED ISVGMRRLGY
501: NRSSKRCKEK WENINKYFKK VKESSRKRPE DSKTCPYFHQ LDALYRTKAL AVGSSSSSSS GVHAPALQAP APSSARAEPA AVTVLAPVPL SSQTPSPAAQ
601: HVEHAAKNLI SNGNGHGNGA AMQVKASNGA PPTVAMFPSS AQAAGNGANS GTATNKLELK QEGVAKETAP VVQPAVAMNH SYGRNDRRDV YDLDSDSMDE
701: DDEDDFDDDD DEEDDDVPGG RNINMPPVLH QYDAHFLQRQ HQHQQQQQQN HNHNHNVVRP NAANGSGNPP AGNATPTSAA GATNGAPFLA MVQ
101: AAFREAALKG PLWEEVSRRL AEMGHTRSAK KCREKFENVD KYYRRTKDGR TGRGDGKTYR FFTELEALHG AHQPPPAAPV SATIVTYSAV PTAPPRVLQA
201: AEPSPPPLFL THQPVPTESP ACLTTTAPVG DASFSDSDGE DTDETADGGK RKRRGGSWGH GGKAMRFFEG LMRQVMERQE AMQSRLLEAI ERRDQDRMIR
301: EEAWRRQEVA RLAREQDALA QERAVAASRD AAVVSFIQRI TGQIVPVQAP SSFPAKPAAT VTSVKPPPLQ PTPVASAAPA PAPPTPRPPV QAQPNVTTPM
401: RTQPQTPQPQ QHVTPTATPE PQPQTPQQQP HHQQSKEIVV HAPEQPPVDM AGGASPSRWP KAEVHALIQL RTEMEARYQD TAPKGPLWED ISVGMRRLGY
501: NRSSKRCKEK WENINKYFKK VKESSRKRPE DSKTCPYFHQ LDALYRTKAL AVGSSSSSSS GVHAPALQAP APSSARAEPA AVTVLAPVPL SSQTPSPAAQ
601: HVEHAAKNLI SNGNGHGNGA AMQVKASNGA PPTVAMFPSS AQAAGNGANS GTATNKLELK QEGVAKETAP VVQPAVAMNH SYGRNDRRDV YDLDSDSMDE
701: DDEDDFDDDD DEEDDDVPGG RNINMPPVLH QYDAHFLQRQ HQHQQQQQQN HNHNHNVVRP NAANGSGNPP AGNATPTSAA GATNGAPFLA MVQ
001: MDQDQHPQYG IPELRQLMKG GGRTTTTTPS TSSHFPSDFF GFNLAPVQPP PHRLHQFTTD QDMGFLPRGI HGLGGGSSTA GNNSNLNAST SGGGVGFSGF
101: LDGGGFGSGV GGDGGGTGRW PRQETLTLLE IRSRLDHKFK EANQKGPLWD EVSRIMSEEH GYQRSGKKCR EKFENLYKYY RKTKEGKAGR QDGKHYRFFR
201: QLEALYGDSN NLVSCPNHNT QFMSSALHGF HTQNPMNVTT TTSNIHNVDS VHGFHQSLSL SNNYNSSELE LMTSSSEGND SSSRRKKRSW KAKIKEFIDT
301: NMKRLIERQD VWLEKLTKVI EDKEEQRMMK EEEWRKIEAA RIDKEHLFWA KERARMEARD VAVIEALQYL TGKPLIKPLC SSPEERTNGN NEIRNNSETQ
401: NENGSDQTMT NNVCVKGSSS CWGEQEILKL MEIRTSMDST FQEILGGCSD EFLWEEIAAK LIQLGFDQRS ALLCKEKWEW ISNGMRKEKK QINKKRKDNS
501: SSCGVYYPRN EENPIYNNRE SGYNDNDPHQ INEQGNVGSS TSNANANANV TTGNPSGAMA ASTNCFPFFM GDGDQNLWES YGLRLSKEEN Q
101: LDGGGFGSGV GGDGGGTGRW PRQETLTLLE IRSRLDHKFK EANQKGPLWD EVSRIMSEEH GYQRSGKKCR EKFENLYKYY RKTKEGKAGR QDGKHYRFFR
201: QLEALYGDSN NLVSCPNHNT QFMSSALHGF HTQNPMNVTT TTSNIHNVDS VHGFHQSLSL SNNYNSSELE LMTSSSEGND SSSRRKKRSW KAKIKEFIDT
301: NMKRLIERQD VWLEKLTKVI EDKEEQRMMK EEEWRKIEAA RIDKEHLFWA KERARMEARD VAVIEALQYL TGKPLIKPLC SSPEERTNGN NEIRNNSETQ
401: NENGSDQTMT NNVCVKGSSS CWGEQEILKL MEIRTSMDST FQEILGGCSD EFLWEEIAAK LIQLGFDQRS ALLCKEKWEW ISNGMRKEKK QINKKRKDNS
501: SSCGVYYPRN EENPIYNNRE SGYNDNDPHQ INEQGNVGSS TSNANANANV TTGNPSGAMA ASTNCFPFFM GDGDQNLWES YGLRLSKEEN Q
Arabidopsis Description
PTLTrihelix transcription factor PTL [Source:UniProtKB/Swiss-Prot;Acc:Q9LZS0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.