Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45956 | Canola | cytosol | 12.82 | 100.0 |
| CDY45955 | Canola | nucleus | 71.66 | 90.23 |
| CDX88320 | Canola | nucleus | 76.17 | 77.57 |
| CDY48545 | Canola | nucleus, plastid | 78.52 | 76.58 |
| CDX68080 | Canola | nucleus | 79.78 | 76.34 |
| AT1G76880.1 | Thale cress | nucleus | 79.24 | 72.8 |
| CDX87563 | Canola | nucleus | 8.66 | 69.57 |
| CDX87564 | Canola | nucleus | 50.18 | 65.11 |
| CDY45957 | Canola | nucleus | 42.42 | 48.16 |
| CDY13568 | Canola | nucleus | 42.06 | 47.26 |
| KRH70308 | Soybean | nucleus | 53.07 | 46.59 |
| KRH08699 | Soybean | nucleus | 53.43 | 45.19 |
| KRG91649 | Soybean | nucleus | 51.08 | 43.94 |
| CDY48546 | Canola | nucleus | 32.49 | 42.86 |
| KRH35149 | Soybean | nucleus | 51.08 | 42.43 |
| CDY62151 | Canola | nucleus | 37.36 | 37.98 |
| CDX85981 | Canola | nucleus | 24.01 | 36.44 |
| CDY71745 | Canola | nucleus | 37.55 | 36.36 |
| CDX93785 | Canola | nucleus | 38.27 | 35.99 |
| CDY44964 | Canola | nucleus | 23.65 | 34.03 |
| CDX85980 | Canola | nucleus | 11.73 | 30.66 |
| GSMUA_Achr8P11770_001 | Banana | nucleus | 9.39 | 30.41 |
| Zm00001d032453_P001 | Maize | nucleus | 42.42 | 29.97 |
| Zm00001d013849_P001 | Maize | nucleus | 41.34 | 29.47 |
| TraesCS1D01G162400.1 | Wheat | nucleus, plastid | 42.96 | 29.13 |
| TraesCS1A01G176700.2 | Wheat | nucleus | 42.96 | 29.13 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 42.78 | 29.12 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 43.32 | 28.99 |
| EER91374 | Sorghum | nucleus | 42.06 | 28.87 |
| KXG40355 | Sorghum | nucleus, plastid | 39.35 | 27.91 |
| TraesCSU01G029700.1 | Wheat | nucleus | 39.17 | 27.57 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 34.3 | 27.46 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 38.81 | 27.11 |
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 38.27 | 27.01 |
| Zm00001d027335_P001 | Maize | nucleus | 38.27 | 26.21 |
| CDY28914 | Canola | nucleus | 17.33 | 24.81 |
| CDX70293 | Canola | nucleus | 25.45 | 24.69 |
| CDY40550 | Canola | nucleus | 17.33 | 24.55 |
| CDX80883 | Canola | nucleus | 22.2 | 24.12 |
| CDY44379 | Canola | nucleus | 25.63 | 24.11 |
| CDY11266 | Canola | nucleus | 22.02 | 23.92 |
| CDY10364 | Canola | nucleus | 21.84 | 23.87 |
| CDY04893 | Canola | nucleus | 21.12 | 23.08 |
| CDY17716 | Canola | nucleus | 14.26 | 22.77 |
| CDY52502 | Canola | nucleus | 23.47 | 21.78 |
| CDY05590 | Canola | nucleus | 23.29 | 21.57 |
| CDX86194 | Canola | nucleus | 23.47 | 21.31 |
| CDY52482 | Canola | nucleus | 23.29 | 21.29 |
| CDX77787 | Canola | nucleus | 19.86 | 17.13 |
Protein Annotations
| EnsemblPlants:CDY65284 | EnsemblPlantsGene:GSBRNA2T00045527001 | Gene3D:1.10.10.60 | GO:A0A078JF43 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| InterPro:SANT/Myb | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF19 | PFAM:PF13837 | PFscan:PS50090 | ProteinID:CDY65284 |
| ProteinID:CDY65284.1 | SEG:seg | SMART:SM00717 | UniParc:UPI0004EDF7F1 | UniProt:A0A078JF43 | MapMan:15.5.20 |
Description
BnaCnng46430DBnaCnng46430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JF43]
Coordinates
chrLK034717:+:6906..9165
Molecular Weight (calculated)
62804.2 Da
IEP (calculated)
8.041
GRAVY (calculated)
-1.019
Length
554 amino acids
Sequence
(BLAST)
(BLAST)
001: MMQQGGSTTT SAATETVPLQ HNESAATEAA AATSAAVGAF EVSEEMSDRG FGGNRWPRQE TLALLKIRSD MGIAFGDATV KGPLWEEVSR KMGELGYIRN
101: AKKCKEKFEN VYKYHKRTKE GRTGKSEGKT YRFFDQLEAL ETHATSSSHH HQPQSQPHNN SSMFSTPPPV TTVIPPTRNI TPSFPNISGD FLSDNSTSSS
201: SSYSTSSDVE VGDTKTTTTR KKKRKRKWKE FFERLMKQVV GKQEELQRKF LEAVEKREHE RMVREESWRV QEIARINREH EILAQERSMS AAKDAAVTAF
301: LQKFSEKPNP QCQLSTTTSR RHSSKRLKRH LLPLLPLLPL LSHTMKTDNG DQNMTPVSAG ALSSSRWPKV EIEALIKLRT NLDSKYEENG PKGPLWEDIS
401: AGMRRLGFNR NSKRCKEKWE NINKYYKKVK ESNKKRPEDS KTCPYFHQLD ALYRERNKFH TNNNVASSSS TSGLVKPDNS VPLMVQPEQQ WPPVTATTVG
501: ATVKPDQHPP QPLDQNFDDE EGTDQEAYDD EEDDEENQEE EGGEFELVPS NNKD
101: AKKCKEKFEN VYKYHKRTKE GRTGKSEGKT YRFFDQLEAL ETHATSSSHH HQPQSQPHNN SSMFSTPPPV TTVIPPTRNI TPSFPNISGD FLSDNSTSSS
201: SSYSTSSDVE VGDTKTTTTR KKKRKRKWKE FFERLMKQVV GKQEELQRKF LEAVEKREHE RMVREESWRV QEIARINREH EILAQERSMS AAKDAAVTAF
301: LQKFSEKPNP QCQLSTTTSR RHSSKRLKRH LLPLLPLLPL LSHTMKTDNG DQNMTPVSAG ALSSSRWPKV EIEALIKLRT NLDSKYEENG PKGPLWEDIS
401: AGMRRLGFNR NSKRCKEKWE NINKYYKKVK ESNKKRPEDS KTCPYFHQLD ALYRERNKFH TNNNVASSSS TSGLVKPDNS VPLMVQPEQQ WPPVTATTVG
501: ATVKPDQHPP QPLDQNFDDE EGTDQEAYDD EEDDEENQEE EGGEFELVPS NNKD
001: MMQLGGGTPT TTAAATTVTT ATAPPPQSNN NDSAATEAAA AAVGAFEVSE EMHDRGFGGN RWPRQETLAL LKIRSDMGIA FRDASVKGPL WEEVSRKMAE
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6K3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.