Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87563 | Canola | nucleus | 67.61 | 69.57 |
| CDY65284 | Canola | nucleus | 100.0 | 12.82 |
| Bra008285.1-P | Field mustard | nucleus | 98.59 | 12.61 |
| CDY48545 | Canola | nucleus, plastid | 80.28 | 10.04 |
| CDX68080 | Canola | nucleus | 80.28 | 9.84 |
| CDX88320 | Canola | nucleus | 66.2 | 8.64 |
| AT1G76880.1 | Thale cress | nucleus | 69.01 | 8.13 |
| CDX85980 | Canola | nucleus | 12.68 | 4.25 |
| KRH08699 | Soybean | nucleus | 32.39 | 3.51 |
| KRH70308 | Soybean | nucleus | 30.99 | 3.49 |
| KRH35149 | Soybean | nucleus | 32.39 | 3.45 |
| KRG91649 | Soybean | nucleus | 30.99 | 3.42 |
| CDY13568 | Canola | nucleus | 18.31 | 2.64 |
| CDY44964 | Canola | nucleus | 12.68 | 2.34 |
| CDY45957 | Canola | nucleus | 15.49 | 2.25 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 19.72 | 2.02 |
| KXG40355 | Sorghum | nucleus, plastid | 21.13 | 1.92 |
| EER91374 | Sorghum | nucleus | 21.13 | 1.86 |
| Zm00001d013849_P001 | Maize | nucleus | 19.72 | 1.8 |
| Zm00001d032453_P001 | Maize | nucleus | 19.72 | 1.79 |
| TraesCSU01G029700.1 | Wheat | nucleus | 19.72 | 1.78 |
| CDX93785 | Canola | nucleus | 14.08 | 1.7 |
| CDY48546 | Canola | nucleus | 9.86 | 1.67 |
| CDX87564 | Canola | nucleus | 9.86 | 1.64 |
| Zm00001d027335_P001 | Maize | nucleus | 18.31 | 1.61 |
| CDY71745 | Canola | nucleus | 12.68 | 1.57 |
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 15.49 | 1.4 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 15.49 | 1.39 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 14.08 | 1.21 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 12.68 | 1.11 |
| TraesCS1A01G176700.2 | Wheat | nucleus | 12.68 | 1.1 |
| TraesCS1D01G162400.1 | Wheat | nucleus, plastid | 12.68 | 1.1 |
| CDY62151 | Canola | nucleus | 8.45 | 1.1 |
| CDX77787 | Canola | nucleus | 9.86 | 1.09 |
| CDY52482 | Canola | nucleus | 7.04 | 0.83 |
| CDX86194 | Canola | nucleus | 7.04 | 0.82 |
| CDY10364 | Canola | nucleus | 5.63 | 0.79 |
| CDY04893 | Canola | nucleus | 5.63 | 0.79 |
| CDY11266 | Canola | nucleus | 5.63 | 0.78 |
| CDX80883 | Canola | nucleus | 5.63 | 0.78 |
| CDY44379 | Canola | nucleus | 5.63 | 0.68 |
| CDX70293 | Canola | nucleus | 4.23 | 0.53 |
| CDY52502 | Canola | nucleus | 4.23 | 0.5 |
| CDY45955 | Canola | nucleus | 2.82 | 0.45 |
| CDY05590 | Canola | nucleus | 2.82 | 0.33 |
| GSMUA_Achr8P11770_001 | Banana | nucleus | 0.0 | 0.0 |
| CDY40550 | Canola | nucleus | 0.0 | 0.0 |
| CDY28914 | Canola | nucleus | 0.0 | 0.0 |
| CDY17716 | Canola | nucleus | 0.0 | 0.0 |
| CDX85981 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY45956 | EnsemblPlantsGene:GSBRNA2T00082956001 | ProteinID:CDY45956 | ProteinID:CDY45956.1 | SEG:seg | UniParc:UPI0004EE0DA4 |
| UniProt:A0A078I7W3 | MapMan:35.2 | : | : | : | : |
Description
BnaA02g17820DBnaA02g17820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7W3]
Coordinates
chrLK032643:+:95742..95957
Molecular Weight (calculated)
8030.6 Da
IEP (calculated)
3.284
GRAVY (calculated)
-1.590
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MVQPEQQWPP VTATTVGATV KPDQHPPQPL DQNFDDEEGT DQEAYDDEED DEENQEEEGG EFELVPSNNK D
001: MTNIYFMTAF LLSLLLSFSH QSIIIEAREG KGCIGICYRS PTPSPSMIDS EEGANKECMD HKGVGSKCPP NLFSSVIDSE EGVYQEYWDI EEHKSKCHCK
101: CPKHEPPTPS PSMIDSEQGV DQEYMDIEEH KSKCHCKCHK HKPPTPSPSI IDSEEANAPT PIEQHKRKCH CKCHKAKAPT PMNEYY
101: CPKHEPPTPS PSMIDSEQGV DQEYMDIEEH KSKCHCKCHK HKPPTPSPSI IDSEEANAPT PIEQHKRKCH CKCHKAKAPT PMNEYY
Arabidopsis Description
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.