Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45957 | Canola | nucleus | 92.7 | 93.65 |
| CDY48546 | Canola | nucleus | 57.0 | 66.9 |
| CDY45955 | Canola | nucleus | 38.95 | 43.64 |
| CDX88320 | Canola | nucleus | 46.45 | 42.1 |
| CDY65284 | Canola | nucleus | 47.26 | 42.06 |
| CDY48545 | Canola | nucleus, plastid | 47.46 | 41.2 |
| CDX68080 | Canola | nucleus | 48.28 | 41.11 |
| KRH70307 | Soybean | nucleus | 47.46 | 39.07 |
| KRG91651 | Soybean | nucleus | 49.7 | 38.89 |
| KRH08698 | Soybean | nucleus | 46.65 | 37.34 |
| CDX87564 | Canola | nucleus | 31.44 | 36.3 |
| CDY62151 | Canola | nucleus | 38.95 | 35.23 |
| CDX85981 | Canola | nucleus | 25.56 | 34.52 |
| CDY71745 | Canola | nucleus | 39.15 | 33.74 |
| CDX93785 | Canola | nucleus | 39.15 | 32.77 |
| CDY44964 | Canola | nucleus | 23.12 | 29.61 |
| CDX85980 | Canola | nucleus | 11.76 | 27.36 |
| Zm00001d013849_P001 | Maize | nucleus | 42.8 | 27.16 |
| Zm00001d032453_P001 | Maize | nucleus | 43.0 | 27.04 |
| TraesCS1D01G162400.1 | Wheat | nucleus, plastid | 44.62 | 26.93 |
| CDY28914 | Canola | nucleus | 21.1 | 26.87 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 44.22 | 26.78 |
| TraesCS1A01G176700.2 | Wheat | nucleus | 44.22 | 26.68 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 44.62 | 26.57 |
| KXG40355 | Sorghum | nucleus, plastid | 41.78 | 26.38 |
| CDY40550 | Canola | nucleus | 20.69 | 26.09 |
| EER91374 | Sorghum | nucleus | 42.6 | 26.02 |
| GSMUA_Achr8P11770_001 | Banana | nucleus | 8.72 | 25.15 |
| Zm00001d027335_P001 | Maize | nucleus | 40.97 | 24.97 |
| TraesCSU01G029700.1 | Wheat | nucleus | 39.76 | 24.9 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 39.76 | 24.72 |
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 39.35 | 24.71 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 34.69 | 24.71 |
| CDX70293 | Canola | nucleus | 26.17 | 22.59 |
| CDY44379 | Canola | nucleus | 26.77 | 22.41 |
| CDY05590 | Canola | nucleus | 26.77 | 22.07 |
| CDY17716 | Canola | nucleus | 15.42 | 21.9 |
| CDY52502 | Canola | nucleus | 26.37 | 21.78 |
| CDY10364 | Canola | nucleus | 22.11 | 21.5 |
| CDY11266 | Canola | nucleus | 21.7 | 20.98 |
| CDY52482 | Canola | nucleus | 25.76 | 20.96 |
| CDX80883 | Canola | nucleus | 21.5 | 20.78 |
| CDY04893 | Canola | nucleus | 21.1 | 20.51 |
| CDX86194 | Canola | nucleus | 25.15 | 20.33 |
| CDX87563 | Canola | nucleus | 2.64 | 18.84 |
| CDY45956 | Canola | cytosol | 2.64 | 18.31 |
| CDX77787 | Canola | nucleus | 23.33 | 17.91 |
Protein Annotations
| EnsemblPlants:CDY13568 | EnsemblPlantsGene:GSBRNA2T00077937001 | Gene3D:1.10.10.60 | GO:A0A078FML7 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| InterPro:SANT/Myb | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF50 | PFAM:PF13837 | PFscan:PS50090 | ProteinID:CDY13568 |
| ProteinID:CDY13568.1 | SEG:seg | SMART:SM00717 | UniParc:UPI0004EE5E9E | UniProt:A0A078FML7 | MapMan:15.5.20 |
Description
BnaC02g23790DBnaC02g23790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FML7]
Coordinates
chrLK032036:-:559391..561614
Molecular Weight (calculated)
57185.0 Da
IEP (calculated)
9.054
GRAVY (calculated)
-1.148
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSGEDEKD MKMEEIGEVG GGGGNRWPRP ETLALLRIRS EMDKAFRDST LKAPLWEEIS RKMMEFGYKR SAKKCKEKFE NVYKYHKRTK EGRTGKSEGK
101: TYRFFEELQA LEALNSYPPE PESQPLKSST ATTTVTTTTS LIPNNHATTI DTGFRPTSND LINNVSSLNL FSSSTSSSTA SDEEEDHHHQ DKRSRKKRKY
201: WKRLFTKLTK ELMAKQEKVQ KRFLEIFENQ ERERISREEA WRVQEVARIN REHKTLVHER SNAVAKDAAI ISFLHKISGG QQQQPRQKHK VPQRKQYHSE
301: HSITFESKEP RPVLFDSNHS LSPSSSRWPK TEVEVLIRIR KNLEANYQEN GTRGPLWEEI SGGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD
401: SKTCPYFNQL EALYNERNKS GALSILPLML TPQLLPQETQ TELKTDQGDK GEEGESEEDD YENEDEEGDN ETSEFEIVLN KSSPMDINNN IFT
101: TYRFFEELQA LEALNSYPPE PESQPLKSST ATTTVTTTTS LIPNNHATTI DTGFRPTSND LINNVSSLNL FSSSTSSSTA SDEEEDHHHQ DKRSRKKRKY
201: WKRLFTKLTK ELMAKQEKVQ KRFLEIFENQ ERERISREEA WRVQEVARIN REHKTLVHER SNAVAKDAAI ISFLHKISGG QQQQPRQKHK VPQRKQYHSE
301: HSITFESKEP RPVLFDSNHS LSPSSSRWPK TEVEVLIRIR KNLEANYQEN GTRGPLWEEI SGGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD
401: SKTCPYFNQL EALYNERNKS GALSILPLML TPQLLPQETQ TELKTDQGDK GEEGESEEDD YENEDEEGDN ETSEFEIVLN KSSPMDINNN IFT
001: MSGNSEGLLE SSGGGVGGSV EEEKDMKMEE TGEGAGSGGN RWPRPETLAL LRIRSEMDKA FRDSTLKAPL WEEISRKMME LGYKRSSKKC KEKFENVYKY
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
Arabidopsis Description
GT-2Trihelix transcription factor GT-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39117]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.