Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028824.1-P | Field mustard | nucleus | 99.8 | 85.76 |
| CDY44379 | Canola | nucleus | 96.84 | 83.36 |
| CDY10364 | Canola | nucleus | 82.05 | 82.05 |
| CDY11266 | Canola | nucleus | 82.25 | 81.76 |
| CDX80883 | Canola | nucleus | 81.26 | 80.78 |
| CDX70293 | Canola | nucleus | 82.25 | 73.03 |
| AT3G10000.1 | Thale cress | nucleus | 59.17 | 62.37 |
| PGSC0003DMT400072404 | Potato | nucleus | 35.11 | 42.89 |
| VIT_08s0007g03820.t01 | Wine grape | nucleus | 45.96 | 41.68 |
| KRG96146 | Soybean | nucleus | 46.75 | 41.0 |
| KRH67857 | Soybean | nucleus | 46.15 | 40.21 |
| Solyc09g009250.2.1 | Tomato | nucleus | 42.01 | 39.23 |
| PGSC0003DMT400007016 | Potato | nucleus | 41.22 | 38.56 |
| GSMUA_Achr8P07630_001 | Banana | nucleus | 29.98 | 38.19 |
| KRH32666 | Soybean | nucleus | 43.59 | 37.21 |
| CDX85981 | Canola | nucleus | 19.33 | 26.85 |
| CDY45955 | Canola | nucleus | 20.32 | 23.41 |
| CDX87564 | Canola | nucleus | 19.53 | 23.18 |
| CDY65284 | Canola | nucleus | 23.08 | 21.12 |
| CDY45957 | Canola | nucleus | 20.32 | 21.11 |
| CDY13568 | Canola | nucleus | 20.51 | 21.1 |
| CDX88320 | Canola | nucleus | 22.49 | 20.96 |
| CDY62151 | Canola | nucleus | 20.71 | 19.27 |
| CDY48545 | Canola | nucleus, plastid | 21.5 | 19.19 |
| CDX93785 | Canola | nucleus | 22.29 | 19.19 |
| CDX68080 | Canola | nucleus | 21.89 | 19.17 |
| CDY71745 | Canola | nucleus | 20.91 | 18.53 |
| Zm00001d032453_P001 | Maize | nucleus | 26.04 | 16.84 |
| Zm00001d013849_P001 | Maize | nucleus | 24.85 | 16.22 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 26.43 | 16.18 |
| TraesCS1D01G162400.1 | Wheat | nucleus, plastid | 26.04 | 16.16 |
| TraesCS1A01G176700.2 | Wheat | nucleus | 25.84 | 16.03 |
| EER91374 | Sorghum | nucleus | 25.44 | 15.99 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 25.64 | 15.97 |
| KXG40355 | Sorghum | nucleus, plastid | 24.26 | 15.75 |
| CDY48546 | Canola | nucleus | 13.02 | 15.71 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 24.46 | 15.64 |
| Zm00001d027335_P001 | Maize | nucleus | 24.65 | 15.45 |
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 23.67 | 15.29 |
| TraesCSU01G029700.1 | Wheat | nucleus | 23.67 | 15.25 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 19.53 | 14.31 |
| CDY05590 | Canola | nucleus | 16.37 | 13.88 |
| CDY52482 | Canola | nucleus | 16.37 | 13.7 |
| CDY52502 | Canola | nucleus | 15.98 | 13.57 |
| CDY17716 | Canola | nucleus | 9.27 | 13.54 |
| CDX86194 | Canola | nucleus | 15.98 | 13.28 |
| CDY28914 | Canola | nucleus | 9.86 | 12.92 |
| CDY40550 | Canola | nucleus | 9.86 | 12.79 |
| CDY44964 | Canola | nucleus | 8.48 | 11.17 |
| CDX77787 | Canola | nucleus | 12.43 | 9.81 |
| CDX85980 | Canola | nucleus | 2.56 | 6.13 |
| CDX87563 | Canola | nucleus | 0.79 | 5.8 |
| CDY45956 | Canola | cytosol | 0.79 | 5.63 |
Protein Annotations
| EnsemblPlants:CDY04893 | EnsemblPlantsGene:GSBRNA2T00119612001 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom | ncoils:Coil |
| PANTHER:PTHR21654 | PANTHER:PTHR21654:SF5 | PFAM:PF13837 | PFscan:PS50090 | ProteinID:CDY04893 | ProteinID:CDY04893.1 |
| SEG:seg | UniParc:UPI0004EE8C94 | MapMan:15.5.20 | : | : | : |
Description
BnaAnng00750D
Coordinates
chrLK031958:+:572797..575627
Molecular Weight (calculated)
57227.1 Da
IEP (calculated)
7.536
GRAVY (calculated)
-1.082
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDHHPQYGV PELRQLMQGG GRATTTESPS TSSHFPSDFF GFNLAPAAPP PPPQHHRLHQ FTTDQEMGFL PRGIHGLGGS SSTAGNNSNL NASSSGGAVG
101: FSGSGGNGGG TGRWPRQETL TLLEIRSRLD HKFKEANQKG PLWDEVSRIM SEEHGYQRSG KKCREKFENL YKYYKKTREG KAGRQDGKHY RFFRQLEALY
201: GDSNNLVPCP SHNTQFMSNA LHGFHTQNGM NVTTTTSNIH NVDSVHGFHS QSLSLSNNYN SSELELMTSS SEGNDSSRRR KKRSWKNKIK EFIDVNMKRL
301: IESQDVWLEK LTKVIEDKEE QRMMKEEEWR KSEAARIAKE HLFWSKERER MEARDVAVIE ALQFLTGKTL IKPLCSSPEE RINGNIEIQK NSENQNENES
401: DQTMTNNKKM NKKRKDNSSS CGGYYPTTEE NTIYNNQESG YNDNDQRHQM NEQGNVGSST SNVNAAAGNP SGAMTANTNC FPFFMGDGDQ NLWESYGLRL
501: NKGENHE
101: FSGSGGNGGG TGRWPRQETL TLLEIRSRLD HKFKEANQKG PLWDEVSRIM SEEHGYQRSG KKCREKFENL YKYYKKTREG KAGRQDGKHY RFFRQLEALY
201: GDSNNLVPCP SHNTQFMSNA LHGFHTQNGM NVTTTTSNIH NVDSVHGFHS QSLSLSNNYN SSELELMTSS SEGNDSSRRR KKRSWKNKIK EFIDVNMKRL
301: IESQDVWLEK LTKVIEDKEE QRMMKEEEWR KSEAARIAKE HLFWSKERER MEARDVAVIE ALQFLTGKTL IKPLCSSPEE RINGNIEIQK NSENQNENES
401: DQTMTNNKKM NKKRKDNSSS CGGYYPTTEE NTIYNNQESG YNDNDQRHQM NEQGNVGSST SNVNAAAGNP SGAMTANTNC FPFFMGDGDQ NLWESYGLRL
501: NKGENHE
001: MDQDQHPQYG IPELRQLMKG GGRTTTTTPS TSSHFPSDFF GFNLAPVQPP PHRLHQFTTD QDMGFLPRGI HGLGGGSSTA GNNSNLNAST SGGGVGFSGF
101: LDGGGFGSGV GGDGGGTGRW PRQETLTLLE IRSRLDHKFK EANQKGPLWD EVSRIMSEEH GYQRSGKKCR EKFENLYKYY RKTKEGKAGR QDGKHYRFFR
201: QLEALYGDSN NLVSCPNHNT QFMSSALHGF HTQNPMNVTT TTSNIHNVDS VHGFHQSLSL SNNYNSSELE LMTSSSEGND SSSRRKKRSW KAKIKEFIDT
301: NMKRLIERQD VWLEKLTKVI EDKEEQRMMK EEEWRKIEAA RIDKEHLFWA KERARMEARD VAVIEALQYL TGKPLIKPLC SSPEERTNGN NEIRNNSETQ
401: NENGSDQTMT NNVCVKGSSS CWGEQEILKL MEIRTSMDST FQEILGGCSD EFLWEEIAAK LIQLGFDQRS ALLCKEKWEW ISNGMRKEKK QINKKRKDNS
501: SSCGVYYPRN EENPIYNNRE SGYNDNDPHQ INEQGNVGSS TSNANANANV TTGNPSGAMA ASTNCFPFFM GDGDQNLWES YGLRLSKEEN Q
101: LDGGGFGSGV GGDGGGTGRW PRQETLTLLE IRSRLDHKFK EANQKGPLWD EVSRIMSEEH GYQRSGKKCR EKFENLYKYY RKTKEGKAGR QDGKHYRFFR
201: QLEALYGDSN NLVSCPNHNT QFMSSALHGF HTQNPMNVTT TTSNIHNVDS VHGFHQSLSL SNNYNSSELE LMTSSSEGND SSSRRKKRSW KAKIKEFIDT
301: NMKRLIERQD VWLEKLTKVI EDKEEQRMMK EEEWRKIEAA RIDKEHLFWA KERARMEARD VAVIEALQYL TGKPLIKPLC SSPEERTNGN NEIRNNSETQ
401: NENGSDQTMT NNVCVKGSSS CWGEQEILKL MEIRTSMDST FQEILGGCSD EFLWEEIAAK LIQLGFDQRS ALLCKEKWEW ISNGMRKEKK QINKKRKDNS
501: SSCGVYYPRN EENPIYNNRE SGYNDNDPHQ INEQGNVGSS TSNANANANV TTGNPSGAMA ASTNCFPFFM GDGDQNLWES YGLRLSKEEN Q
Arabidopsis Description
PTLTrihelix transcription factor PTL [Source:UniProtKB/Swiss-Prot;Acc:Q9LZS0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.