Factsheet for AT3G10000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04893	Canola	nucleus	62.37	59.17
Bra028824.1-P	Field mustard	nucleus	64.66	52.71
CDY44379	Canola	nucleus	64.45	52.63
AT5G03680.1	Thale cress	nucleus	63.83	51.95
PGSC0003DMT400072404	Potato	nucleus	32.85	38.07
VIT_08s0007g03820.t01	Wine grape	nucleus	43.24	37.21
KRG96146	Soybean	nucleus	44.7	37.2
KRH67857	Soybean	nucleus	44.28	36.6
GSMUA_Achr8P07630_001	Banana	nucleus	29.52	35.68
KRH32666	Soybean	nucleus	42.62	34.51
PGSC0003DMT400007016	Potato	nucleus	38.46	34.13
Solyc09g009250.2.1	Tomato	nucleus	38.25	33.89
AT1G76880.1	Thale cress	nucleus	24.12	19.24
AT1G76890.2	Thale cress	nucleus	22.04	18.43
AT1G33240.1	Thale cress	nucleus	22.25	15.99
Zm00001d032453_P001	Maize	nucleus	25.16	15.43
Zm00001d013849_P001	Maize	nucleus	24.53	15.19
TraesCS1D01G162400.1	Wheat	nucleus, plastid	25.16	14.81
TraesCS1A01G176700.2	Wheat	nucleus	25.16	14.81
HORVU1Hr1G046940.4	Barley	nucleus	25.36	14.73
EER91374	Sorghum	nucleus	24.53	14.62
TraesCS1B01G203300.2	Wheat	nucleus	24.74	14.62
KXG40355	Sorghum	nucleus, plastid	23.7	14.6
TraesCS5A01G558200.1	Wheat	nucleus, plastid	23.28	14.27
Zm00001d027335_P001	Maize	nucleus	23.49	13.97
HORVU4Hr1G089120.1	Barley	nucleus, plastid	22.87	13.87
TraesCSU01G029700.1	Wheat	nucleus	22.45	13.72
AT5G47660.1	Thale cress	nucleus	11.02	13.32
TraesCS4B01G396900.1	Wheat	nucleus	19.13	13.29
AT5G28300.1	Thale cress	nucleus	16.63	12.92

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.20	EntrezGene:820161	UniProt:A0A178VLV1	ProteinID:AEE74846.1	EMBL:AJ630487
ArrayExpress:AT3G10000	EnsemblPlantsGene:AT3G10000	RefSeq:AT3G10000	TAIR:AT3G10000	RefSeq:AT3G10000-TAIR-G	EnsemblPlants:AT3G10000.1
TAIR:AT3G10000.1	EMBL:AY568659	Unigene:At.53243	Symbol:EDA31	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010197	GO:GO:0016043
GO:GO:0030154	InterPro:IPR017877	InterPro:Myb-like_dom	RefSeq:NP_187611.2	ProteinID:OAP06866.1	PFAM:PF13837
PFscan:PS50090	PANTHER:PTHR21654	PANTHER:PTHR21654:SF5	UniProt:Q700D8	InterPro:SANT/Myb	SMART:SM00717
UniParc:UPI0000352977	SEG:seg	:	:	:	:

Description

EDA31EDA31 [Source:UniProtKB/TrEMBL;Acc:A0A178VLV1]

Coordinates

chr3:+:3076782..3079188

Molecular Weight (calculated)

55505.7 Da

IEP (calculated)

7.916

GRAVY (calculated)

-1.111

Length

481 amino acids

Sequence
(BLAST)

001: MEDHQNHPQY GIEQPSSQFS SDLFGFNLVS APDQHHRLHF TDHEISLLPR GIQGLTVAGN NSNTITTIQS GGCVGGFSGF TDGGGTGRWP RQETLMLLEV
101: RSRLDHKFKE ANQKGPLWDE VSRIMSEEHG YTRSGKKCRE KFENLYKYYK KTKEGKSGRR QDGKNYRFFR QLEAIYGESK DSVSCYNNTQ FIMTNALHSN
201: FRASNIHNIV PHHQNPLMTN TNTQSQSLSI SNNFNSSSDL DLTSSSEGNE TTKREGMHWK EKIKEFIGVH MERLIEKQDF WLEKLMKIVE DKEHQRMLRE
301: EEWRRIEAER IDKERSFWTK ERERIEARDV AVINALQYLT GRALIRPDSS SPTERINGNG SDKMMADNEF ADEGNKGKMD KKQMNKKRKE KWSSHGGNHP
401: RTKENMMIYN NQETKINDFC RDDDQCHHEG YSPSNSKNAG TPSCSNAMAA STKCFPLLEG EGDQNLWEGY GLKQRKENNH Q

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.