Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G03680.1 | EES01406 | AT3G01090.2 | 25697797 |
| AT5G03680.1 | EES19859 | AT3G01090.2 | 25697797 |
| AT5G03680.1 | EES01406 | AT3G01090.2 | 25697797 |
| AT5G03680.1 | EES19859 | AT3G01090.2 | 25697797 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d032453_P001 | Maize | nucleus | 88.35 | 90.94 |
| Zm00001d013849_P001 | Maize | nucleus | 82.53 | 85.71 |
| TraesCS1A01G176700.2 | Wheat | nucleus | 66.91 | 66.1 |
| TraesCS1D01G162400.1 | Wheat | nucleus, plastid | 66.42 | 65.61 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 67.04 | 65.34 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 65.68 | 65.11 |
| GSMUA_Achr8P11760_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 38.17 | 55.3 |
| GSMUA_Achr11P... | Banana | nucleus | 42.13 | 53.21 |
| GSMUA_Achr1P04100_001 | Banana | nucleus | 40.4 | 50.86 |
| GSMUA_Achr4P24780_001 | Banana | nucleus | 41.26 | 49.78 |
| GSMUA_Achr9P18800_001 | Banana | nucleus | 35.19 | 49.22 |
| KXG40355 | Sorghum | nucleus, plastid | 47.46 | 49.04 |
| GSMUA_Achr2P11910_001 | Banana | nucleus | 38.54 | 48.59 |
| GSMUA_Achr5P19950_001 | Banana | nucleus, plastid | 39.28 | 48.03 |
| GSMUA_Achr4P29130_001 | Banana | nucleus | 40.64 | 46.92 |
| KRH35148 | Soybean | cytosol, mitochondrion, nucleus | 11.15 | 45.69 |
| OQU82045 | Sorghum | nucleus, plastid | 42.01 | 45.38 |
| CDY45955 | Canola | nucleus | 24.54 | 45.0 |
| Bra015716.1-P | Field mustard | nucleus | 30.61 | 44.83 |
| VIT_04s0044g00510.t01 | Wine grape | nucleus | 28.0 | 44.31 |
| CDX88320 | Canola | nucleus | 29.74 | 44.12 |
| Bra008285.1-P | Field mustard | nucleus | 29.37 | 42.7 |
| CDY13568 | Canola | nucleus | 26.02 | 42.6 |
| CDY45957 | Canola | nucleus | 25.65 | 42.42 |
| CDY65284 | Canola | nucleus | 28.87 | 42.06 |
| AT1G76880.1 | Thale cress | nucleus | 31.23 | 41.79 |
| CDX68080 | Canola | nucleus | 29.86 | 41.62 |
| KRG91649 | Soybean | nucleus | 33.21 | 41.61 |
| CDY48545 | Canola | nucleus, plastid | 29.12 | 41.37 |
| Bra003702.1-P | Field mustard | nucleus | 23.42 | 41.27 |
| KRH35149 | Soybean | nucleus | 33.83 | 40.93 |
| Bra008286.1-P | Field mustard | nucleus | 26.15 | 40.81 |
| KRH70308 | Soybean | nucleus | 31.6 | 40.41 |
| VIT_18s0072g00670.t01 | Wine grape | nucleus | 32.22 | 40.25 |
| GSMUA_Achr2P00580_001 | Banana | nucleus | 34.82 | 40.09 |
| KRH08699 | Soybean | nucleus | 32.47 | 40.0 |
| Solyc11g005380.1.1 | Tomato | nucleus | 24.41 | 39.8 |
| Bra003703.1-P | Field mustard | nucleus | 29.86 | 39.31 |
| KRH53849 | Soybean | nucleus | 24.16 | 39.24 |
| KRH38181 | Soybean | nucleus | 23.67 | 38.98 |
| EES05815 | Sorghum | nucleus | 34.7 | 38.89 |
| PGSC0003DMT400010112 | Potato | nucleus | 24.16 | 38.77 |
| AT1G76890.2 | Thale cress | nucleus | 27.39 | 38.43 |
| PGSC0003DMT400061942 | Potato | nucleus | 29.86 | 38.38 |
| Bra015715.1-P | Field mustard | nucleus | 27.26 | 38.33 |
| KRH64101 | Soybean | nucleus | 23.67 | 38.2 |
| CDY48546 | Canola | nucleus | 19.58 | 37.62 |
| Solyc12g056510.1.1 | Tomato | nucleus | 30.24 | 37.48 |
| Solyc04g071360.2.1 | Tomato | nucleus | 30.11 | 37.16 |
| KRG91651 | Soybean | nucleus | 27.63 | 35.4 |
| KRH70307 | Soybean | nucleus | 26.27 | 35.39 |
| CDX87564 | Canola | nucleus | 18.71 | 35.36 |
| KRH08698 | Soybean | nucleus | 26.39 | 34.58 |
| VIT_08s0007g03820.t01 | Wine grape | nucleus | 21.07 | 30.41 |
| VIT_13s0074g00400.t01 | Wine grape | nucleus | 20.82 | 29.95 |
| KRH35147 | Soybean | nucleus | 10.41 | 29.47 |
| KRG96146 | Soybean | nucleus | 20.82 | 29.07 |
| KRH67857 | Soybean | nucleus | 20.45 | 28.35 |
| PGSC0003DMT400007016 | Potato | nucleus | 18.84 | 28.04 |
| Solyc09g009250.2.1 | Tomato | nucleus | 18.59 | 27.62 |
| Bra005777.1-P | Field mustard | nucleus | 19.45 | 27.4 |
| CDX70293 | Canola | nucleus | 19.21 | 27.15 |
| AT5G03680.1 | Thale cress | nucleus | 19.83 | 27.07 |
| Bra009518.1-P | Field mustard | nucleus | 19.08 | 26.97 |
| CDX80883 | Canola | nucleus | 16.85 | 26.67 |
| Bra028824.1-P | Field mustard | nucleus | 19.45 | 26.61 |
| KRH32666 | Soybean | nucleus | 19.58 | 26.6 |
| CDY44379 | Canola | nucleus | 19.33 | 26.49 |
| CDY11266 | Canola | nucleus | 16.73 | 26.47 |
| CDY10364 | Canola | nucleus | 16.23 | 25.84 |
| PGSC0003DMT400072404 | Potato | nucleus | 13.26 | 25.78 |
| CDY04893 | Canola | nucleus | 15.99 | 25.44 |
| AT3G10000.1 | Thale cress | nucleus | 14.62 | 24.53 |
| KRH34733 | Soybean | nucleus | 16.36 | 24.35 |
| KRG92051 | Soybean | nucleus | 15.99 | 24.02 |
| EES06104 | Sorghum | nucleus | 20.94 | 22.84 |
| CDY45956 | Canola | cytosol | 1.86 | 21.13 |
Protein Annotations
| EnsemblPlants:EER91374 | EnsemblPlantsGene:SORBI_3001G194600 | EntrezGene:8065849 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| InterPro:SANT/Myb | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF48 | PFAM:PF13837 | PFscan:PS50090 | ProteinID:EER91374 |
| ProteinID:EER91374.1 | RefSeq:XP_002464376.1 | SEG:seg | SMART:SM00717 | UniParc:UPI0001A823C4 | UniProt:C5WVE4 |
| MapMan:15.5.20 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:17426080..17431011
Molecular Weight (calculated)
85121.8 Da
IEP (calculated)
6.668
GRAVY (calculated)
-0.840
Length
807 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQQQHGGGG GGGGGGGGGP AQQFGAQQVE MPPPFSPAGG ASQRISLAEA PSPISSRPPA SSSAPAQQYD ELGASGAGAV LGFDAEGLAA AAAGEEGASG
101: GSAGNRWPRQ ETLELLKIRS DMDAAFRDAT LKGPLWEQVS RKLADKGYSR SAKKCKEKFE NVHKYYKRTK ESRAGRNDGK TYRFFTQLEA LHGTGGAAPA
201: SSVASQVPPA GPSAVRVPAE PPPAVLAGGV GMPTMGYPSF STSNTEDYTD EDDSDDEGTQ ELVGGGGGGA DERGKRKRVS EGGASAAGGG SGKMMRFFEG
301: LMKQVMERQE AMQQRFLEAI EKREQDRMIR EEAWRRQEMT RLAREQEILA QERAMAASRD AAVLSFIQKI TGQTIPMPSI AAPTINAMPP PPPSHPKPPP
401: PQPHPTPIAS ASPAPPPPQP PASQTPPPQQ QQQQKPPMPA STPQAPAPQQ QSMDIVMTTA ETTPRADTPV HEGSSGGATS SRWPKAEVHA LIQLRSNLDT
501: RYQEAGPKGP LWEEISAGMR RLGYNRNAKR CKEKWENINK YFKKVKESNK KRPEDSKTCP YFHQLDALYR NKAALSSSGA GAVVHAVNAS SSAQPQETVT
601: VVTAAAPISQ TPPPLPPPTT QPSQSHHAAK NGGTASNAAC TGTTGNGNGA GAPVHGSRGM QTQPSNGSVA ASRFVGEGGG ATPAPAKKPE DIMKEMMEQR
701: HPQPQQQTQA VVSGYNRIDG ADSDNMDEDD DEDDYDDDDD EDEDVDGNKM QYKIQFQHQQ QHHQPPQHPN TVRPNAGAGG GNPPGTAAPS TAAAPTTTAG
801: SFLGMVK
101: GSAGNRWPRQ ETLELLKIRS DMDAAFRDAT LKGPLWEQVS RKLADKGYSR SAKKCKEKFE NVHKYYKRTK ESRAGRNDGK TYRFFTQLEA LHGTGGAAPA
201: SSVASQVPPA GPSAVRVPAE PPPAVLAGGV GMPTMGYPSF STSNTEDYTD EDDSDDEGTQ ELVGGGGGGA DERGKRKRVS EGGASAAGGG SGKMMRFFEG
301: LMKQVMERQE AMQQRFLEAI EKREQDRMIR EEAWRRQEMT RLAREQEILA QERAMAASRD AAVLSFIQKI TGQTIPMPSI AAPTINAMPP PPPSHPKPPP
401: PQPHPTPIAS ASPAPPPPQP PASQTPPPQQ QQQQKPPMPA STPQAPAPQQ QSMDIVMTTA ETTPRADTPV HEGSSGGATS SRWPKAEVHA LIQLRSNLDT
501: RYQEAGPKGP LWEEISAGMR RLGYNRNAKR CKEKWENINK YFKKVKESNK KRPEDSKTCP YFHQLDALYR NKAALSSSGA GAVVHAVNAS SSAQPQETVT
601: VVTAAAPISQ TPPPLPPPTT QPSQSHHAAK NGGTASNAAC TGTTGNGNGA GAPVHGSRGM QTQPSNGSVA ASRFVGEGGG ATPAPAKKPE DIMKEMMEQR
701: HPQPQQQTQA VVSGYNRIDG ADSDNMDEDD DEDDYDDDDD EDEDVDGNKM QYKIQFQHQQ QHHQPPQHPN TVRPNAGAGG GNPPGTAAPS TAAAPTTTAG
801: SFLGMVK
001: MMQLGGGTPT TTAAATTVTT ATAPPPQSNN NDSAATEAAA AAVGAFEVSE EMHDRGFGGN RWPRQETLAL LKIRSDMGIA FRDASVKGPL WEEVSRKMAE
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6K3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.