Factsheet for Bra003702.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48546	Canola	nucleus	69.87	76.19
Bra008286.1-P	Field mustard	nucleus	70.96	62.86
Bra015715.1-P	Field mustard	nucleus	77.95	62.2
AT1G76890.2	Thale cress	nucleus	75.76	60.35
Bra015716.1-P	Field mustard	nucleus	45.85	38.11
Bra008285.1-P	Field mustard	nucleus	45.2	37.3
KRH70307	Soybean	nucleus	47.82	36.56
KRG91651	Soybean	nucleus	49.34	35.87
KRH08698	Soybean	nucleus	47.82	35.55
Bra003703.1-P	Field mustard	nucleus	46.29	34.58
Bra040010.1-P	Field mustard	nucleus	39.52	29.1
Bra036731.1-P	Field mustard	nucleus	39.08	28.41
Bra022149.1-P	Field mustard	nucleus	21.18	25.06
GSMUA_Achr8P11770_001	Banana	nucleus	9.17	24.56
Zm00001d032453_P001	Maize	nucleus	41.7	24.36
TraesCS1D01G162400.1	Wheat	nucleus, plastid	43.45	24.36
Zm00001d013849_P001	Maize	nucleus	41.27	24.32
TraesCS1B01G203300.2	Wheat	nucleus	43.01	24.2
TraesCS1A01G176700.2	Wheat	nucleus	43.01	24.11
KXG40355	Sorghum	nucleus, plastid	41.05	24.07
HORVU1Hr1G046940.4	Barley	nucleus	43.01	23.79
EER91374	Sorghum	nucleus	41.27	23.42
Bra024925.1-P	Field mustard	nucleus	16.16	22.63
HORVU4Hr1G089120.1	Barley	nucleus, plastid	38.65	22.32
TraesCS5A01G558200.1	Wheat	nucleus, plastid	38.21	22.29
TraesCSU01G029700.1	Wheat	nucleus	38.21	22.24
TraesCS4B01G396900.1	Wheat	nucleus	33.19	21.97
Zm00001d027335_P001	Maize	nucleus	38.65	21.88
Bra009518.1-P	Field mustard	nucleus	25.76	20.67
Bra005777.1-P	Field mustard	nucleus	25.76	20.59
Bra020607.1-P	Field mustard	nucleus	27.29	20.56
Bra028824.1-P	Field mustard	nucleus	26.2	20.34
Bra009994.1-P	Field mustard	nucleus	25.98	19.51

Protein Annotations

EnsemblPlants:Bra003702.1	EnsemblPlants:Bra003702.1-P	EnsemblPlantsGene:Bra003702	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017877	InterPro:Myb-like_dom	InterPro:SANT/Myb
PANTHER:PTHR21654	PANTHER:PTHR21654:SF50	PFAM:PF13837	PFscan:PS50090	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI000254154A	UniProt:M4CHL9	MapMan:15.5.20	:	:

Description

AT1G76890 (E=4e-053) GT2, AT-GT2 | GT2; transcription factor

Coordinates

chrA07:+:14588374..14590108

Molecular Weight (calculated)

52806.6 Da

IEP (calculated)

10.340

GRAVY (calculated)

-1.037

Length

458 amino acids

Sequence
(BLAST)

001: MSGNSSELLD SSGDGGLGGS GEEEKDMKME KTGEACGGRG NRWPRPETLA LLRIRSVMDK TFRDSTLKAS LWEEISRKMM ELGYKRSSKK CKEKFENVYK
101: YHKRTKDGRT GKSKGNTYRF FDELEAFETI NSYPPGSKFQ PAKPPAAAAT TTRQMFHLDV PKTASNQQVS VKPITTNPTF LAKQPSLTTH FPFYNNNHST
201: KVDDTGFKPT SSDLLNNVSS LNLFSRSTSS SDEEEDQEKR SRKKRKLTKE LMEKQEKMHK RFLKALETGE RERISREEAW RVQEVERINS EHNTLVHERS
301: NIAAKDVAII SFLQKISGGQ QQPHQQNYKG LPMASPSSSR WPKTEVEALI RIRKNLEANY LENGTKGPLW EEISAEIRRF GYNRSTKRCK EKWENINKYF
401: KKVKESNKRR PLDSKTCPCF HQLEALYNER NKTGPLPILP LLVNRDSFFF HKKRRLSD

Best Arabidopsis Sequence Match ( AT1G76890.2 )
(BLAST)

001: MSGNSEGLLE SSGGGVGGSV EEEKDMKMEE TGEGAGSGGN RWPRPETLAL LRIRSEMDKA FRDSTLKAPL WEEISRKMME LGYKRSSKKC KEKFENVYKY
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT

Arabidopsis Description

GT-2Trihelix transcription factor GT-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39117]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.