Factsheet for Bra008286.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45957	Canola	nucleus	94.39	100.0
Bra015715.1-P	Field mustard	nucleus	84.72	76.31
Bra003702.1-P	Field mustard	nucleus	62.86	70.96
Bra015716.1-P	Field mustard	nucleus	45.65	42.83
Bra008285.1-P	Field mustard	nucleus	45.45	42.34
KRH70307	Soybean	nucleus	47.0	40.57
KRG91651	Soybean	nucleus	48.55	39.84
Bra003703.1-P	Field mustard	nucleus	46.62	39.31
KRH08698	Soybean	nucleus	46.62	39.12
Bra036731.1-P	Field mustard	nucleus	39.27	32.22
Bra040010.1-P	Field mustard	nucleus	38.49	31.99
Zm00001d032453_P001	Maize	nucleus	41.2	27.17
Zm00001d013849_P001	Maize	nucleus	40.62	27.03
TraesCS1D01G162400.1	Wheat	nucleus, plastid	42.55	26.93
Bra022149.1-P	Field mustard	nucleus	20.12	26.87
TraesCS1B01G203300.2	Wheat	nucleus	42.17	26.78
TraesCS1A01G176700.2	Wheat	nucleus	41.97	26.56
HORVU1Hr1G046940.4	Barley	nucleus	42.36	26.45
KXG40355	Sorghum	nucleus, plastid	39.65	26.25
EER91374	Sorghum	nucleus	40.81	26.15
Zm00001d027335_P001	Maize	nucleus	38.88	24.85
TraesCS5A01G558200.1	Wheat	nucleus, plastid	37.52	24.71
GSMUA_Achr8P11770_001	Banana	nucleus	8.12	24.56
TraesCSU01G029700.1	Wheat	nucleus	37.33	24.52
HORVU4Hr1G089120.1	Barley	nucleus, plastid	37.33	24.34
TraesCS4B01G396900.1	Wheat	nucleus	32.5	24.28
Bra024925.1-P	Field mustard	nucleus	14.7	23.24
Bra009518.1-P	Field mustard	nucleus	24.56	22.24
Bra028824.1-P	Field mustard	nucleus	25.34	22.2
Bra005777.1-P	Field mustard	nucleus	24.37	21.99
Bra020607.1-P	Field mustard	nucleus	25.34	21.55
Bra009994.1-P	Field mustard	nucleus	24.18	20.49

Protein Annotations

EnsemblPlants:Bra008286.1	EnsemblPlants:Bra008286.1-P	EnsemblPlantsGene:Bra008286	Gene3D:1.10.10.60	InterPro:IPR017877	InterPro:Myb-like_dom
InterPro:SANT/Myb	ncoils:Coil	PANTHER:PTHR21654	PANTHER:PTHR21654:SF50	PFAM:PF13837	PFscan:PS50090
SEG:seg	SMART:SM00717	UniParc:UPI00025460F8	UniProt:M4CVN9	MapMan:15.5.20	:

Description

AT1G76890 (E=7e-074) GT2, AT-GT2 | GT2; transcription factor

Coordinates

chrA02:-:14385450..14387506

Molecular Weight (calculated)

59558.6 Da

IEP (calculated)

7.775

GRAVY (calculated)

-1.082

Length

517 amino acids

Sequence
(BLAST)

001: MGGSGEDEKD MKMEEIGEVG GGGGNRWPRP ETLALLRIRS EMDKAFRDST LKAPLWEEVS RKMKELGYKR SAKKCKEKFE NVYKYHKRTK EGRTGKSEGK
101: TYRFFEELQA LEALNSYPPE PGSQPLKSST ATTTVITTTS LIPLNHHQVS VKPIATIPTF LAKQPSPTTP FPIYSNNHAT TIDTGFSPTS NDLINNVSSL
201: NLFSSSTSSS TASDEEEDHH HQDNRSRKKR KYWKGLFTKL TNELMEKQEK VQKRFLETFE NQERERISRE EAWRVQEVAR INREHETLVH ERSNAVAKDA
301: VIISFLHKIS GGQQQQQQKH EVPQRKQYHS EHSITFESKE PRPVLFDSNH SLSPSSSRWP KTEVEALIRI RKNLEANYQE NGTRGPLWEE ISGGMRRLGY
401: NRSAKRCKEK WENINKYFKK VKESNKKRPL DSKTCPYFNQ LEALYNERNK SGALSILPLM LTPQLLPQET QTEVKTDQGD KAEEGESEED DYENEYEEGD
501: NETSEFEILL NKSSPMD

Best Arabidopsis Sequence Match ( AT1G76890.2 )
(BLAST)

001: MSGNSEGLLE SSGGGVGGSV EEEKDMKMEE TGEGAGSGGN RWPRPETLAL LRIRSEMDKA FRDSTLKAPL WEEISRKMME LGYKRSSKKC KEKFENVYKY
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT

Arabidopsis Description

GT-2Trihelix transcription factor GT-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39117]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.