Factsheet for Bra028824.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04893	Canola	nucleus	85.76	99.8
Bra005777.1-P	Field mustard	nucleus	82.88	85.34
Bra009518.1-P	Field mustard	nucleus	81.19	83.89
AT3G10000.1	Thale cress	nucleus	52.71	64.66
VIT_08s0007g03820.t01	Wine grape	nucleus	45.76	48.3
KRG96146	Soybean	nucleus	45.25	46.19
KRH67857	Soybean	nucleus	44.75	45.36
Solyc09g009250.2.1	Tomato	nucleus	41.36	44.94
PGSC0003DMT400007016	Potato	nucleus	40.68	44.28
PGSC0003DMT400072404	Potato	nucleus	30.34	43.13
GSMUA_Achr8P07630_001	Banana	nucleus	28.81	42.71
KRH32666	Soybean	nucleus	42.54	42.26
Bra003702.1-P	Field mustard	nucleus	20.34	26.2
Bra015716.1-P	Field mustard	nucleus	23.9	25.59
Bra008285.1-P	Field mustard	nucleus	23.9	25.41
Bra008286.1-P	Field mustard	nucleus	22.2	25.34
Bra015715.1-P	Field mustard	nucleus	22.88	23.52
Bra003703.1-P	Field mustard	nucleus	23.73	22.84
Bra040010.1-P	Field mustard	nucleus	23.39	22.19
Bra036731.1-P	Field mustard	nucleus	23.22	21.75
Zm00001d032453_P001	Maize	nucleus	26.95	20.28
Zm00001d013849_P001	Maize	nucleus	25.93	19.69
HORVU1Hr1G046940.4	Barley	nucleus	27.63	19.69
TraesCS1A01G176700.2	Wheat	nucleus	27.12	19.58
TraesCS1D01G162400.1	Wheat	nucleus, plastid	27.12	19.58
TraesCS1B01G203300.2	Wheat	nucleus	26.95	19.53
EER91374	Sorghum	nucleus	26.61	19.45
KXG40355	Sorghum	nucleus, plastid	25.25	19.08
HORVU4Hr1G089120.1	Barley	nucleus, plastid	25.25	18.79
Zm00001d027335_P001	Maize	nucleus	25.42	18.54
TraesCS5A01G558200.1	Wheat	nucleus, plastid	24.41	18.34
TraesCSU01G029700.1	Wheat	nucleus	24.41	18.3
Bra020607.1-P	Field mustard	nucleus	18.14	17.6
Bra022149.1-P	Field mustard	nucleus	11.53	17.57
TraesCS4B01G396900.1	Wheat	nucleus	20.51	17.49
Bra009994.1-P	Field mustard	nucleus	17.46	16.89
Bra024925.1-P	Field mustard	nucleus	9.32	16.82

Protein Annotations

EnsemblPlants:Bra028824.1	EnsemblPlants:Bra028824.1-P	EnsemblPlantsGene:Bra028824	Gene3D:1.10.10.60	GO:GO:0007275	GO:GO:0008150
GO:GO:0009987	GO:GO:0010197	GO:GO:0016043	GO:GO:0030154	InterPro:IPR017877	InterPro:Myb-like_dom
ncoils:Coil	PANTHER:PTHR21654	PANTHER:PTHR21654:SF5	PFAM:PF13837	PFscan:PS50090	SEG:seg
UniParc:UPI000254302D	UniProt:M4EJ58	MapMan:15.5.20	:	:	:

Description

AT5G03680 (E=2e-233) PTL | PTL (PETAL LOSS); transcription factor

Coordinates

chrA02:+:1889698..1892523

Molecular Weight (calculated)

66352.8 Da

IEP (calculated)

6.645

GRAVY (calculated)

-0.973

Length

590 amino acids

Sequence
(BLAST)

001: MDDHHPQYGV PELRQLMQGG GRATTTESPS TSSHFPSDFF GFNLAPAAPP PPPQHHRLHQ FTTDQEMGFL PRGIHGLGGN SSTAGNNSNL NASSSGGAVG
101: FSGFLDGGGF GGSSGGNGGG TGRWPRQETL TLLEIRSRLD HKFKEANQKG PLWDEVSRIM SEEHGYQRSG KKCREKFENL YKYYKKTREG KAGRQDGKHY
201: RFFRQLEALY GDSNNLVPCP SHNTQFMSNA LHGFHTQNGM NVTTTTSNIH NVDSVHGFHS QSLSLSNNYN SSELELMTSS SEGNDSSRRR KKRSWKNKIK
301: EFIDVNMKRL IESQDVWLEK LTKVIEDKEE QRMMKEEEWR KSEAARIAKE HLFWSKERER MEARDVAVIE ALQFLTGKTL IKPLCSSPEE RINGNIEIQK
401: NSENQNENES DQTMTNNVSI EGSGSCWNEQ EITKLMEIRT SMDSAFQEIL GGCSDDFLWE EVAGKMAQLG FDQKSALLCK EKWEWISNGK KKMNKKRKDN
501: SSSCGGYYPT TEENTIYNNQ ESGYNDNDQR HQMNEQGNVG SSTSNVNAAA GNPSGAMTAN TNCFPFFMGD GDQNLWESYG LRLNKGENHE

Best Arabidopsis Sequence Match ( AT5G03680.1 )
(BLAST)

001: MDQDQHPQYG IPELRQLMKG GGRTTTTTPS TSSHFPSDFF GFNLAPVQPP PHRLHQFTTD QDMGFLPRGI HGLGGGSSTA GNNSNLNAST SGGGVGFSGF
101: LDGGGFGSGV GGDGGGTGRW PRQETLTLLE IRSRLDHKFK EANQKGPLWD EVSRIMSEEH GYQRSGKKCR EKFENLYKYY RKTKEGKAGR QDGKHYRFFR
201: QLEALYGDSN NLVSCPNHNT QFMSSALHGF HTQNPMNVTT TTSNIHNVDS VHGFHQSLSL SNNYNSSELE LMTSSSEGND SSSRRKKRSW KAKIKEFIDT
301: NMKRLIERQD VWLEKLTKVI EDKEEQRMMK EEEWRKIEAA RIDKEHLFWA KERARMEARD VAVIEALQYL TGKPLIKPLC SSPEERTNGN NEIRNNSETQ
401: NENGSDQTMT NNVCVKGSSS CWGEQEILKL MEIRTSMDST FQEILGGCSD EFLWEEIAAK LIQLGFDQRS ALLCKEKWEW ISNGMRKEKK QINKKRKDNS
501: SSCGVYYPRN EENPIYNNRE SGYNDNDPHQ INEQGNVGSS TSNANANANV TTGNPSGAMA ASTNCFPFFM GDGDQNLWES YGLRLSKEEN Q

Arabidopsis Description

PTLTrihelix transcription factor PTL [Source:UniProtKB/Swiss-Prot;Acc:Q9LZS0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.