Factsheet for Bra015715.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008286.1-P	Field mustard	nucleus	76.31	84.72
Bra003702.1-P	Field mustard	nucleus	62.2	77.95
Bra015716.1-P	Field mustard	nucleus	43.55	45.37
Bra008285.1-P	Field mustard	nucleus	42.68	44.14
KRH70307	Soybean	nucleus	44.08	42.24
KRG91651	Soybean	nucleus	46.34	42.22
Bra003703.1-P	Field mustard	nucleus	44.08	41.27
KRH08698	Soybean	nucleus	43.9	40.91
Bra036731.1-P	Field mustard	nucleus	36.59	33.33
Bra040010.1-P	Field mustard	nucleus	35.89	33.12
TraesCS1D01G162400.1	Wheat	nucleus, plastid	40.77	28.64
TraesCS1B01G203300.2	Wheat	nucleus	40.42	28.5
TraesCS1A01G176700.2	Wheat	nucleus	40.42	28.4
Zm00001d013849_P001	Maize	nucleus	38.33	28.31
Zm00001d032453_P001	Maize	nucleus	38.5	28.19
HORVU1Hr1G046940.4	Barley	nucleus	40.59	28.14
EER91374	Sorghum	nucleus	38.33	27.26
KXG40355	Sorghum	nucleus, plastid	36.93	27.14
Bra022149.1-P	Field mustard	nucleus	17.94	26.61
GSMUA_Achr8P11770_001	Banana	nucleus	7.84	26.32
Zm00001d027335_P001	Maize	nucleus	36.06	25.59
TraesCS5A01G558200.1	Wheat	nucleus, plastid	34.67	25.35
HORVU4Hr1G089120.1	Barley	nucleus, plastid	34.84	25.22
TraesCSU01G029700.1	Wheat	nucleus	34.49	25.16
TraesCS4B01G396900.1	Wheat	nucleus	29.97	24.86
Bra024925.1-P	Field mustard	nucleus	13.59	23.85
Bra009518.1-P	Field mustard	nucleus	23.17	23.29
Bra020607.1-P	Field mustard	nucleus	24.39	23.03
Bra028824.1-P	Field mustard	nucleus	23.52	22.88
Bra005777.1-P	Field mustard	nucleus	22.82	22.86
Bra009994.1-P	Field mustard	nucleus	23.17	21.8

Protein Annotations

EnsemblPlants:Bra015715.1	EnsemblPlants:Bra015715.1-P	EnsemblPlantsGene:Bra015715	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017877	InterPro:Myb-like_dom	InterPro:SANT/Myb
ncoils:Coil	PANTHER:PTHR21654	PANTHER:PTHR21654:SF50	PFAM:PF13837	PFscan:PS50090	SEG:seg
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0002541A29	UniProt:M4DGT9	MapMan:15.5.20	:

Description

AT1G76890 (E=5e-203) GT2, AT-GT2 | GT2; transcription factor

Coordinates

chrA07:-:21209512..21211497

Molecular Weight (calculated)

65402.4 Da

IEP (calculated)

7.739

GRAVY (calculated)

-1.150

Length

574 amino acids

Sequence
(BLAST)

001: MSGNSSGLLD SSGGGVGGLG EEEKDMKMEE TNEVGGGGGG GSRWPRPETL ALLKIRSEMD KSFRDSTLKA PLWEEISRKM MELGYKRSAK KCKEKFENVY
101: KYHKRTKEGR TGKSEGKTYR FFEELEAFES QPAKSPAATT TTTATTSLIP WISSNHPSTE KTPSPLKHQQ HQVSVKPIAT NPTFLAKQPP PTTPFPFYSN
201: NHATTPDHTG FKPTSNDLLN NVSSLNLFSS STSSSTASDE EEDQEKRSRK KRKYWKGLFT KLTKELMEKQ EKMQKKFLET LENRERERIS REEAWKVQEV
301: ARINKEHETL VHERSNAAAK DAAIISFLHK ISGGGGQQQQ QQQPQQQPQQ NQKLPQRKQY QSEQHSITFE SKEPMPVPLD ATMKMGNHSL SPSSSRWPKT
401: EVEALIRIRK NLEANYQENG TKGPLWEEIS AGMRRLGYNR SAKRCKEKWE NINKYFKKVK ESNKKRPLDS KTCPYFHQLE ALYNERNKNG ALPMLPLMVT
501: PQRQLLLPQE TQTEFETDGR DKVGNKEGEE EGESEEDDYE DEDEEGEGDN DTSEFEIVLN KTSSPMDINN NLFT

Best Arabidopsis Sequence Match ( AT1G76890.2 )
(BLAST)

001: MSGNSEGLLE SSGGGVGGSV EEEKDMKMEE TGEGAGSGGN RWPRPETLAL LRIRSEMDKA FRDSTLKAPL WEEISRKMME LGYKRSSKKC KEKFENVYKY
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT

Arabidopsis Description

GT-2Trihelix transcription factor GT-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39117]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.