Factsheet for Bra036731.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44964	Canola	nucleus	59.52	97.4
CDY71745	Canola	nucleus	88.41	97.38
CDY62151	Canola	nucleus	82.22	95.05
Bra040010.1-P	Field mustard	nucleus	85.87	86.98
AT1G33240.1	Thale cress	nucleus	84.92	79.97
HORVU6Hr1G025060.1	Barley	nucleus	9.52	47.24
Bra015716.1-P	Field mustard	nucleus	35.24	40.29
Bra008286.1-P	Field mustard	nucleus	32.22	39.27
Bra003702.1-P	Field mustard	nucleus	28.41	39.08
Bra008285.1-P	Field mustard	nucleus	34.29	38.92
Os04t0541100-01	Rice	nucleus	35.71	37.19
TraesCS2D01G387100.1	Wheat	nucleus	43.33	36.64
Bra015715.1-P	Field mustard	nucleus	33.33	36.59
HORVU6Hr1G025090.1	Barley	cytosol, nucleus, plastid	10.48	36.46
Bra003703.1-P	Field mustard	nucleus	35.4	36.38
OQU82045	Sorghum	nucleus, plastid	42.86	36.14
HORVU2Hr1G092650.3	Barley	nucleus	42.38	35.98
TraesCS2A01G389200.1	Wheat	nucleus	42.54	35.83
Zm00001d002801_P001	Maize	nucleus	44.44	35.53
HORVU6Hr1G061300.6	Barley	nucleus	35.56	35.39
TraesCS2B01G407400.1	Wheat	nucleus	42.54	35.26
Zm00001d025960_P002	Maize	nucleus	38.89	34.6
Zm00001d017420_P001	Maize	nucleus	36.51	34.23
TraesCS6B01G284400.3	Wheat	nucleus, plastid	34.92	33.85
Os02t0648300-01	Rice	nucleus	23.49	33.56
TraesCS6A01G240200.1	Wheat	nucleus	35.4	33.43
TraesCS6D01G222500.1	Wheat	nucleus	35.56	33.38
Zm00001d051316_P002	Maize	nucleus	34.92	32.93
EES05815	Sorghum	nucleus	36.19	31.67
Bra022149.1-P	Field mustard	nucleus	17.78	28.94
Bra024925.1-P	Field mustard	nucleus	13.81	26.61
Bra020607.1-P	Field mustard	nucleus	22.86	23.68
Bra009518.1-P	Field mustard	nucleus	21.43	23.64
Bra005777.1-P	Field mustard	nucleus	21.43	23.56
Bra028824.1-P	Field mustard	nucleus	21.75	23.22
Bra009994.1-P	Field mustard	nucleus	22.22	22.95
Os10t0516500-01	Rice	cytosol, nucleus	7.78	20.08

Protein Annotations

EnsemblPlants:Bra036731.1	EnsemblPlants:Bra036731.1-P	EnsemblPlantsGene:Bra036731	Gene3D:1.10.10.60	InterPro:IPR017877	InterPro:Myb-like_dom
InterPro:SANT/Myb	PANTHER:PTHR21654	PANTHER:PTHR21654:SF13	PFAM:PF13837	PFscan:PS50090	SEG:seg
SMART:SM00717	UniParc:UPI0002546188	UniProt:M4F6M1	MapMan:15.5.20	:	:

Description

AT1G33240 (E=7e-179) AT-GTL1, AT-GTL2 | AT-GTL1 (GT2-LIKE 1); DNA binding / transcription factor

Coordinates

chrA08:+:7571083..7573445

Molecular Weight (calculated)

70291.5 Da

IEP (calculated)

6.475

GRAVY (calculated)

-0.977

Length

630 amino acids

Sequence
(BLAST)

001: MEQGGGGGGG NEVVEEASPI SSRPPANMEE LMRFSAAADD GGGLGGGSSS SSSGNRWPRE ETLALLRIRS EMDSTFRDAT LKAPLWEHVS RKLLELGYKR
101: NAKKCKEKFE NVQKYHKRTK ETRGGRHEGK TYKFFSQLEA LNTITSAPPS SLDVTPLSVA NPVQQPSSQF PVFSLTQTPP PSQPLPPHTV SFTPNPPPPP
201: SVDPPFPGGT FSSHSSSTAS GMGSDDDDDD MDVDHAGPSS HKRKRENRGG KMMELFQGLV RQVMQKQAAM QRSFLEALEK REQERLAREE AWKRQEMSRL
301: AREHEIMTQE RAASASRDAA IISLIQKITG HTIQLPPSLS SQPSPPPPAA KRPSSQAVEP PHSQPIMAIP QQQVLPPPPH QPPPQQQQQE MIMSSDQSLP
401: SSSRWPKEEI LALINLRSGM EPRYQDNVPK GLLWEEISSS MKRMGYNRNA KRCKEKWENI NKYYKKVKES NKKRPQDAKT CPYYHRLDLL YRSKVLGSGA
501: GSSTSALPQD QISTVQKQSP VPAMKPSQEG DVNVHQGEEP REETPQGAEK PEDLVMRELM QQKQQQQEED SMIGEYEKIE ASHKYNMEEE EMDEELDEDE
601: KSAAYEIAFQ SPANRGGNGH SEPPFLTMVQ

Best Arabidopsis Sequence Match ( AT1G33240.1 )
(BLAST)

001: MEQGGGGGGN EVVEEASPIS SRPPANNLEE LMRFSAAADD GGLGGGGGGG GGGSASSSSG NRWPREETLA LLRIRSDMDS TFRDATLKAP LWEHVSRKLL
101: ELGYKRSSKK CKEKFENVQK YYKRTKETRG GRHDGKAYKF FSQLEALNTT PPSSSLDVTP LSVANPILMP SSSSSPFPVF SQPQPQTQTQ PPQTHNVSFT
201: PTPPPLPLPS MGPIFTGVTF SSHSSSTASG MGSDDDDDDM DVDQANIAGS SSRKRKRGNR GGGGKMMELF EGLVRQVMQK QAAMQRSFLE ALEKREQERL
301: DREEAWKRQE MARLAREHEV MSQERAASAS RDAAIISLIQ KITGHTIQLP PSLSSQPPPP YQPPPAVTKR VAEPPLSTAQ SQSQQPIMAI PQQQILPPPP
401: PSHPHAHQPE QKQQQQPQQE MVMSSEQSSL PSSSRWPKAE ILALINLRSG MEPRYQDNVP KGLLWEEIST SMKRMGYNRN AKRCKEKWEN INKYYKKVKE
501: SNKKRPQDAK TCPYFHRLDL LYRNKVLGSG GGSSTSGLPQ DQKQSPVTAM KPPQEGLVNV QQTHGSASTE EEEPIEESPQ GTEKPEDLVM RELIQQQQQL
601: QQQESMIGEY EKIEESHNYN NMEEEEDQEM DEEELDEDEK SAAFEIAFQS PANRGGNGHT EPPFLTMVQ

Arabidopsis Description

AT-GTL1GT-2-like 1 [Source:TAIR;Acc:AT1G33240]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.