Factsheet for Os02t0648300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017420_P001	Maize	nucleus	58.73	38.54
HORVU6Hr1G061300.6	Barley	nucleus	55.1	38.39
TraesCS6B01G284400.3	Wheat	nucleus, plastid	56.46	38.31
Zm00001d051316_P002	Maize	nucleus	57.82	38.17
EES05815	Sorghum	nucleus	60.77	37.22
TraesCS6A01G240200.1	Wheat	nucleus	55.78	36.88
TraesCS6D01G222500.1	Wheat	nucleus	55.33	36.36
CDY44964	Canola	nucleus	31.07	35.58
Os04t0541100-01	Rice	nucleus	47.85	34.88
CDX85980	Canola	nucleus	16.1	33.49
CDY62151	Canola	nucleus	31.29	25.32
CDY71745	Canola	nucleus	32.43	25.0
Os10t0516500-01	Rice	cytosol, nucleus	13.61	24.59
CDX93785	Canola	nucleus	32.65	24.45
Bra040010.1-P	Field mustard	nucleus	33.33	23.63
Os02t0104500-01	Rice	nucleus	25.62	23.54
Bra036731.1-P	Field mustard	nucleus	33.56	23.49
AT1G33240.1	Thale cress	nucleus	33.79	22.27
CDX85981	Canola	nucleus	14.74	17.81

Protein Annotations

EnsemblPlants:Os02t0648300-01	EnsemblPlantsGene:Os02g0648300	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017877	InterPro:Myb-like_dom	InterPro:SANT/Myb	ncoils:Coil
PANTHER:PTHR21654	PANTHER:PTHR21654:SF21	PFAM:PF13837	PFscan:PS50090	ProteinID:BAS80038.1	SEG:seg
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000393B6DD	UniProt:A0A0P0VMM0	MapMan:15.5.20	:

Description

SANT domain, DNA binding domain containing protein. (Os02t0648300-01)

Coordinates

chr2:-:26099326..26101023

Molecular Weight (calculated)

47501.8 Da

IEP (calculated)

4.432

GRAVY (calculated)

-0.791

Length

441 amino acids

Sequence
(BLAST)

001: MPVEDPQPLA MAWMMLPGAA DLGFLSMSSE SESDDESDEE EEEEEAVAPG GGGREGLGDD GDGDGEGGSS TRKLMAMFEG MMRQVTEKQD AMQRVFLETL
101: EKWEAERTER EEAWRRKEVA RINREREQLS KERAAAASRD AALIAFLQRV GGAGGEPVRL SPSSAGATRH DAAAAGLQLV PVPAPRAKAE DAWAAAGGDG
201: SGTTAPSRWP KEEVQALIDL RMEKEEQYND MGPKGPLWEE IAAGMQRIGY NRSAKRCKEK WENINKYFKK VKESNKRRPE DSKTCPYFHQ LDAIYRKKHF
301: AGRGGGGGGV TIAASHSSLA IVTVSEQDNP SQRELEGKSS NDVGNVQLAV PLLVHNAPDK KVEGSEGEPN VTAAAEETDS DEMCGEYTDD GDDDDKMQYK
401: IEFQKPTAGG GGDGNDAPVP ATTAAATSSA PTSNTSFLAV Q

Best Arabidopsis Sequence Match ( AT1G76880.1 )
(BLAST)

001: MMQLGGGTPT TTAAATTVTT ATAPPPQSNN NDSAATEAAA AAVGAFEVSE EMHDRGFGGN RWPRQETLAL LKIRSDMGIA FRDASVKGPL WEEVSRKMAE
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL

Arabidopsis Description

Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6K3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.