Factsheet for Zm00001d051316_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017420_P001	Maize	nucleus	79.04	78.57
EES05815	Sorghum	nucleus	83.83	77.78
Os02t0648300-01	Rice	nucleus	38.17	57.82
HORVU6Hr1G061300.6	Barley	nucleus	52.25	55.13
TraesCS6B01G284400.3	Wheat	nucleus, plastid	51.2	52.62
TraesCS6D01G222500.1	Wheat	nucleus	52.84	52.61
TraesCS6A01G240200.1	Wheat	nucleus	52.1	52.17
CDX85981	Canola	nucleus	21.26	38.9
CDY62151	Canola	nucleus	31.29	38.35
Zm00001d002801_P001	Maize	nucleus	44.61	37.82
CDX93785	Canola	nucleus	32.93	37.35
Zm00001d025960_P002	Maize	nucleus	39.07	36.86
CDY71745	Canola	nucleus	31.44	36.71
Bra040010.1-P	Field mustard	nucleus	33.08	35.53
Bra036731.1-P	Field mustard	nucleus	32.93	34.92
CDY44964	Canola	nucleus	19.46	33.77
Zm00001d032453_P001	Maize	nucleus	38.77	33.04
AT1G33240.1	Thale cress	nucleus	32.93	32.88
Zm00001d013849_P001	Maize	nucleus	37.87	32.56
CDX85980	Canola	nucleus	9.88	31.13
Zm00001d027335_P001	Maize	nucleus	36.98	30.53
Zm00001d014938_P001	Maize	nucleus	22.16	22.29
Zm00001d054080_P001	Maize	nucleus	21.26	19.89

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100273264	MapMan:15.5.20	ProteinID:AQK54012.1	ProteinID:AQK54014.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017877
UniProt:K7TYX1	InterPro:Myb-like_dom	PFAM:PF13837	PFscan:PS50090	PANTHER:PTHR21654	PANTHER:PTHR21654:SF21
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0002210297	EnsemblPlantsGene:Zm00001d051316	EnsemblPlants:Zm00001d051316_P002
EnsemblPlants:Zm00001d051316_T002	SEG:seg	:	:	:	:

Description

Trihelix-transcription factor 16Putative homeodomain-like transcription factor superfamily protein isoform 1%3B Putative homeodomain-like transcription factor superfamily protein isoform 2

Coordinates

chr4:-:153362817..153366616

Molecular Weight (calculated)

71713.4 Da

IEP (calculated)

5.978

GRAVY (calculated)

-0.758

Length

668 amino acids

Sequence
(BLAST)

001: MLHHHGGAGS PYMAPETAGT GTGTAPFSPT PTGLAVSVTA AIPALPTMQL QPAGSSANFE ELAAGGSGAG VAVRLQDEDM QADLGASGAG ASGNRWPREE
101: TLALIRIRTE MDADFRSSPL KAPLWENVAR KLAGLGYHRS AKKCKEKFEN VDKYYRRTKD ARAGRQDGKS YRFFSQLEAL HASAPPLPPP PSGMTTVQAG
201: PHQPMEMAWT AGPTVLGPAA VAGLPDLSFS SMSESDSEYD SDDDDDDSGA GEEGLSGGEC DREMMATFER MMKQFTEKQD AMQRVFLETL ERCEAERTAR
301: EEAWRRQEVA RMNREREQLA RERAAAASRD AALIAFLQRV GGGQGEPARL PPHGAGVVPP PPMPDCAPPS PRRHAAAASL QQLVPVPPKA VEALARAGGE
401: GGGSTPSRWP KEEVEALIQM RNEKGEKYHD AGAKGPLWED IAAAMRGIGY SRSAKRCKEK WENINKYYKK VKESNKRRPE DSKTCPYFHQ LDAMYRNKHR
501: SGTGGRTAPR TNMASAVAVA ATVQDNPSKR ELEGKSSNDA DNRKNDEQGN VLTSPASGDT APGGAAKNKT AEGNVDDTDV QHQHQQRFSA DETDSDDDMD
601: MARNYTVYTE EGNNEDKMKY KMGVQERDVI GSSGNVLAPP PSPAAVAATA AAPTSSAAPT SSTFLAVQ

Best Arabidopsis Sequence Match ( AT5G28300.1 )
(BLAST)

001: MFDGGVPEQI HRFIASPPPP PPLPPHQPAA ERSLPFPVSF SSFNTNHQPQ HMLSLDSRKI IHHHHHHHHH DIKDGGATTG EWIGQTDHDD SDNHHQHHHH
101: HPWCSDEVLA LLRFRSTVEN WFPEFTWEHT SRKLAEVGFK RSPQECKEKF EEEERRYFNS NNNNNNNTND HQHIGNYNNK GNNYRIFSEV EEFYHHGHDN
201: EHVSSEVGDN QNKRTNLVEG KGNVGETVQD LMAEDKLRDQ DQGQVEEASM ENQRNSIEVG KVGNVEDDAK SSSSSSLMMI MKEKKRKKRK KEKERFGVLK
301: GFCEGLVRNM IAQQEEMHKK LLEDMVKKEE EKIAREEAWK KQEIERVNKE VEIRAQEQAM ASDRNTNIIK FISKFTDHDL DVVQNPTSPS QDSSSLALRK
401: TQGRRKFQTS SSLLPQTLTP HNLLTIDKSL EPFSTKTLKP KNQNPKPPKS DDKSDLGKRW PKDEVLALIN IRRSISNMND DDHKDENSLS TSSKAVPLWE
501: RISKKMLEIG YKRSAKRCKE KWENINKYFR KTKDVNKKRP LDSRTCPYFH QLTALYSQPP TGTTATTATT ATSARDLDTR PEENRVGSQD PDISVPMHVD
601: GDGAGDKSNV QFSGFDLEF

Arabidopsis Description

Trihelix transcription factor GTL2 [Source:UniProtKB/Swiss-Prot;Acc:Q8H181]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.