Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU82045 | Sorghum | nucleus, plastid | 84.04 | 79.65 |
| Zm00001d002801_P001 | Maize | nucleus | 84.46 | 75.89 |
| Os04t0541100-01 | Rice | nucleus | 60.88 | 71.24 |
| TraesCS2D01G387100.1 | Wheat | nucleus | 67.51 | 64.16 |
| TraesCS2A01G389200.1 | Wheat | nucleus | 66.53 | 62.97 |
| TraesCS2B01G407400.1 | Wheat | nucleus | 65.96 | 61.45 |
| HORVU2Hr1G092650.3 | Barley | nucleus | 63.7 | 60.78 |
| HORVU6Hr1G025060.1 | Barley | nucleus | 9.04 | 50.39 |
| CDY62151 | Canola | nucleus | 32.06 | 41.65 |
| Zm00001d017420_P001 | Maize | nucleus | 39.12 | 41.22 |
| CDY71745 | Canola | nucleus | 32.77 | 40.56 |
| CDX93785 | Canola | nucleus | 33.19 | 39.9 |
| Zm00001d032453_P001 | Maize | nucleus | 43.36 | 39.16 |
| Zm00001d051316_P002 | Maize | nucleus | 36.86 | 39.07 |
| Bra040010.1-P | Field mustard | nucleus | 34.18 | 38.91 |
| CDX85981 | Canola | nucleus | 20.06 | 38.9 |
| Bra036731.1-P | Field mustard | nucleus | 34.6 | 38.89 |
| Zm00001d013849_P001 | Maize | nucleus | 42.09 | 38.35 |
| AT1G33240.1 | Thale cress | nucleus | 35.59 | 37.67 |
| HORVU6Hr1G025090.1 | Barley | cytosol, nucleus, plastid | 9.32 | 36.46 |
| Zm00001d027335_P001 | Maize | nucleus | 40.25 | 35.23 |
| CDX85980 | Canola | nucleus | 10.45 | 34.91 |
| CDY44964 | Canola | nucleus | 18.93 | 34.81 |
| Zm00001d014938_P001 | Maize | nucleus | 18.93 | 20.18 |
| Zm00001d054080_P001 | Maize | nucleus | 18.79 | 18.63 |
Protein Annotations
| EnsemblPlants:Zm00001d025960_P002 | EnsemblPlants:Zm00001d025960_T002 | EnsemblPlantsGene:Zm00001d025960 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| InterPro:SANT/Myb | ncoils:Coil | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF24 | PFAM:PF13837 | PFscan:PS50090 |
| ProteinID:AQK45164.1 | SEG:seg | SMART:SM00717 | UniParc:UPI000844061F | UniProt:A0A1D6JB98 | MapMan:15.5.20 |
Description
GT-2-like 1
Coordinates
chr10:-:134919047..134922703
Molecular Weight (calculated)
75414.9 Da
IEP (calculated)
7.520
GRAVY (calculated)
-0.851
Length
708 amino acids
Sequence
(BLAST)
(BLAST)
001: MQHQGGGGGG GGGTQLGAPP PDMGPFSPPT AATGPMPLSS RPPSAQPQPP PQQPQQPGTT STSYQELAVV SGSGPGGGFD DETVGGGGGS SGASSNRWPR
101: AETQALIRIR SEMDATFRDA TLKGHLWEDV SRKLADLGYK RSAKKCKEKF ENVHKYYKRT KEGRTGRQDG KSYRFFDELE ALHAAAPQPQ PPLQKQQQQL
201: PPASTTAPPL HAFAAPVSAP PPISSMPPPT GPMQPAPISS AAPAGQVQTL VELPGAHQPL NLLQGFSFSS MSESESEGDD MTAETGGSHD RLGKRKRGGD
301: GGSGSKKTMS FFEGLMQQEV ARLNHEQEQL AQERAAAASR DAAIIAFLQR IGGQSVQPPT AVVVPMPAPV PAAHTTPPPK QPSRQQQPPS PQATPQPKPI
401: SAAPLQQHPT QQQPKDASQQ DAGTPRSAPA TSGPSLELVP VADHHVESGL GRAASSSRWP KTEVDALIQL RMDLDMRYLE TGAKGPLWED ISSGMRRLGY
501: NRSSKRCKEK WENINKYYKK VKESNKKRPE DSKTCPYFHQ LEAIYIGRKH LRSGGAAAAA PPAPAYLDQL NSSRHEIEGK NINDDKRNNG GSGGGTQVPP
601: TSNGETAPTT TLAAFGTDTG MKKPEDITRM LSEHPPREFT TEDETDSDEY TDDGEEGEDD GKMQYRIQFQ RPNPGGTTTN TAPAPPATTP APAVPTSAPT
701: SAFLAMVQ
101: AETQALIRIR SEMDATFRDA TLKGHLWEDV SRKLADLGYK RSAKKCKEKF ENVHKYYKRT KEGRTGRQDG KSYRFFDELE ALHAAAPQPQ PPLQKQQQQL
201: PPASTTAPPL HAFAAPVSAP PPISSMPPPT GPMQPAPISS AAPAGQVQTL VELPGAHQPL NLLQGFSFSS MSESESEGDD MTAETGGSHD RLGKRKRGGD
301: GGSGSKKTMS FFEGLMQQEV ARLNHEQEQL AQERAAAASR DAAIIAFLQR IGGQSVQPPT AVVVPMPAPV PAAHTTPPPK QPSRQQQPPS PQATPQPKPI
401: SAAPLQQHPT QQQPKDASQQ DAGTPRSAPA TSGPSLELVP VADHHVESGL GRAASSSRWP KTEVDALIQL RMDLDMRYLE TGAKGPLWED ISSGMRRLGY
501: NRSSKRCKEK WENINKYYKK VKESNKKRPE DSKTCPYFHQ LEAIYIGRKH LRSGGAAAAA PPAPAYLDQL NSSRHEIEGK NINDDKRNNG GSGGGTQVPP
601: TSNGETAPTT TLAAFGTDTG MKKPEDITRM LSEHPPREFT TEDETDSDEY TDDGEEGEDD GKMQYRIQFQ RPNPGGTTTN TAPAPPATTP APAVPTSAPT
701: SAFLAMVQ
001: MMQLGGGTPT TTAAATTVTT ATAPPPQSNN NDSAATEAAA AAVGAFEVSE EMHDRGFGGN RWPRQETLAL LKIRSDMGIA FRDASVKGPL WEEVSRKMAE
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6K3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.