Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d054080_P001 | Maize | nucleus | 87.5 | 81.37 |
| Os02t0104500-01 | Rice | nucleus | 50.75 | 70.21 |
| TraesCS6A01G013200.2 | Wheat | nucleus | 74.1 | 65.34 |
| TraesCS6D01G016300.1 | Wheat | nucleus | 74.25 | 65.13 |
| TraesCS6B01G020100.1 | Wheat | nucleus | 74.4 | 64.91 |
| HORVU0Hr1G014900.1 | Barley | nucleus | 68.67 | 64.5 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.78 | 44.99 |
| GSMUA_Achr7P04610_001 | Banana | nucleus | 32.38 | 44.42 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 41.72 | 41.41 |
| VIT_04s0008g01850.t01 | Wine grape | nucleus | 35.99 | 37.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 9.19 | 28.5 |
| PGSC0003DMT400080676 | Potato | nucleus | 18.22 | 25.97 |
| Zm00001d017420_P001 | Maize | nucleus | 23.04 | 22.77 |
| Zm00001d051316_P002 | Maize | nucleus | 22.29 | 22.16 |
| KRH34074 | Soybean | nucleus | 19.28 | 22.03 |
| KRG96954 | Soybean | nucleus | 19.43 | 21.5 |
| KRH68714 | Soybean | nucleus | 19.88 | 21.19 |
| Zm00001d013849_P001 | Maize | nucleus | 24.55 | 20.98 |
| CDY52482 | Canola | nucleus | 18.98 | 20.79 |
| Zm00001d032453_P001 | Maize | nucleus | 24.4 | 20.66 |
| CDX86194 | Canola | nucleus | 18.98 | 20.66 |
| Bra009994.1-P | Field mustard | nucleus | 18.98 | 20.66 |
| CDY52502 | Canola | nucleus | 18.52 | 20.6 |
| Bra020607.1-P | Field mustard | nucleus | 18.83 | 20.56 |
| Zm00001d002801_P001 | Maize | nucleus | 24.4 | 20.56 |
| CDY05590 | Canola | nucleus | 18.37 | 20.4 |
| AT5G28300.1 | Thale cress | nucleus | 18.67 | 20.03 |
| Zm00001d027335_P001 | Maize | nucleus | 23.8 | 19.53 |
| Solyc08g061910.2.1 | Tomato | nucleus | 7.23 | 19.2 |
| KRG92655 | Soybean | nucleus | 19.28 | 19.08 |
| Zm00001d025960_P002 | Maize | nucleus | 20.18 | 18.93 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.13 | 18.19 |
Protein Annotations
| EnsemblPlants:Zm00001d014938_P001 | EnsemblPlants:Zm00001d014938_T001 | EnsemblPlantsGene:Zm00001d014938 | EntrezGene:100273304 | Gene3D:1.10.10.60 | InterPro:IPR017877 |
| InterPro:Myb-like_dom | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF31 | PFAM:PF13837 | PFscan:PS50090 | ProteinID:AQK67661.1 |
| SEG:seg | UniParc:UPI000221C037 | UniProt:A0A1D6GXX8 | MapMan:15.5.20 | : | : |
Description
Trihelix-transcription factor 22Trihelix transcription factor GTL2
Coordinates
chr5:-:69105228..69108023
Molecular Weight (calculated)
70656.1 Da
IEP (calculated)
5.991
GRAVY (calculated)
-0.796
Length
664 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSGYGGVSE FQQFIMDGGF AMSAPPQQQQ PPATAQEMGG PFRYQPLHHH ALPPPHHHHH AQHMPPHFAH FGAAPPPPPF TQQLLHQAAA GGHHHLQLFH
101: EQQHHHKPQP PARWAPHPHH HHHHHHLGFD VEAAVPESSG AAGGGSAGAS AGAAPSGVPP FLAAAMNFKL AVDAGGGSGA TEGTDDGGGA AGSGMMLHVG
201: SGGGGGDEAA TESRLRRWTG DEETSIKEPT WRPLDIDYLQ SSSSSKRTGK EKVATPAAPA NYFKKGDAAA AGGGNYKLFS ELEAIYKPGS GGAQTGSGSC
301: LTGDDNAILE PAVADLPAVG PQQLNTSETS AGEEAAAVVQ PQQQPQASAD AARRKRKRRR QEQLSASASF FERLVQRLME HQESLHRGFL EAMERRERER
401: AARDEAWRRQ EADKFAREAG ARAQDRASAA AREAAIIAYL EKISGESITL PAPPAAAASG DDATAAGKEL VPYDGGDATA AEGGGGSLHL SSTSRWPKHE
501: VEALIRVRTG LEGRFQELGL KGPLWEEVSA RMAAAGYGRN AKRCKEKWEN INKYFRKAKE SGKKRPAHAK TCPYFDELDR LYSRSADGGG GEARQLGSSE
601: LLDAVIKYPD VRYGPPVFGG GNANNEGGED DDSDGEEEEE EEEDGIGKGR AGDDQDDEVD NDDE
101: EQQHHHKPQP PARWAPHPHH HHHHHHLGFD VEAAVPESSG AAGGGSAGAS AGAAPSGVPP FLAAAMNFKL AVDAGGGSGA TEGTDDGGGA AGSGMMLHVG
201: SGGGGGDEAA TESRLRRWTG DEETSIKEPT WRPLDIDYLQ SSSSSKRTGK EKVATPAAPA NYFKKGDAAA AGGGNYKLFS ELEAIYKPGS GGAQTGSGSC
301: LTGDDNAILE PAVADLPAVG PQQLNTSETS AGEEAAAVVQ PQQQPQASAD AARRKRKRRR QEQLSASASF FERLVQRLME HQESLHRGFL EAMERRERER
401: AARDEAWRRQ EADKFAREAG ARAQDRASAA AREAAIIAYL EKISGESITL PAPPAAAASG DDATAAGKEL VPYDGGDATA AEGGGGSLHL SSTSRWPKHE
501: VEALIRVRTG LEGRFQELGL KGPLWEEVSA RMAAAGYGRN AKRCKEKWEN INKYFRKAKE SGKKRPAHAK TCPYFDELDR LYSRSADGGG GEARQLGSSE
601: LLDAVIKYPD VRYGPPVFGG GNANNEGGED DDSDGEEEEE EEEDGIGKGR AGDDQDDEVD NDDE
001: MMQLGGGTPT TTAAATTVTT ATAPPPQSNN NDSAATEAAA AAVGAFEVSE EMHDRGFGGN RWPRQETLAL LKIRSDMGIA FRDASVKGPL WEEVSRKMAE
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6K3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.