Factsheet for GSMUA_AchrUn_randomP04120_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P24120_001	Banana	nucleus	71.86	50.37
GSMUA_Achr7P04610_001	Banana	nucleus	42.64	41.32
Zm00001d014938_P001	Maize	nucleus	44.99	31.78
Zm00001d054080_P001	Maize	nucleus	46.48	30.53
TraesCS6A01G013200.2	Wheat	nucleus	47.97	29.88
EES06104	Sorghum	nucleus	47.12	29.86
TraesCS6D01G016300.1	Wheat	nucleus	48.19	29.85
TraesCS6B01G020100.1	Wheat	nucleus	47.97	29.57
HORVU0Hr1G014900.1	Barley	nucleus	41.79	27.72
Os02t0104500-01	Rice	nucleus	26.44	25.83
VIT_04s0008g01850.t01	Wine grape	nucleus	33.9	24.65
Solyc08g061910.2.1	Tomato	nucleus	9.81	18.4
PGSC0003DMT400080676	Potato	nucleus	17.48	17.6
GSMUA_Achr8P07630_001	Banana	nucleus	14.29	16.83
GSMUA_Achr9P18800_001	Banana	nucleus	15.78	12.82
GSMUA_Achr2P00580_001	Banana	nucleus	18.98	12.7
GSMUA_Achr11P...	Banana	nucleus	17.27	12.68
GSMUA_Achr8P11770_001	Banana	nucleus	4.48	12.28
KRH34074	Soybean	nucleus	15.14	12.22
GSMUA_Achr8P11760_001	Banana	endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	14.5	12.21
KRG96954	Soybean	nucleus	15.56	12.17
CDY05590	Canola	nucleus	15.14	11.87
CDY52502	Canola	nucleus	14.93	11.73
KRH68714	Soybean	nucleus	15.56	11.72
GSMUA_Achr2P11910_001	Banana	nucleus	15.78	11.56
Bra020607.1-P	Field mustard	nucleus	14.93	11.51
AT5G28300.1	Thale cress	nucleus	14.93	11.31
GSMUA_Achr4P29130_001	Banana	nucleus	16.42	11.02
GSMUA_Achr1P04100_001	Banana	nucleus	14.93	10.92
GSMUA_Achr5P19950_001	Banana	nucleus, plastid	15.35	10.91
CDY52482	Canola	nucleus	14.07	10.89
GSMUA_Achr4P24780_001	Banana	nucleus	15.35	10.76
Bra009994.1-P	Field mustard	nucleus	13.86	10.66
CDX86194	Canola	nucleus	13.86	10.66
KRG92655	Soybean	nucleus	14.93	10.43
GSMUA_AchrUn_...	Banana	nucleus	14.5	9.74
GSMUA_AchrUn_...	Banana	nucleus	0.85	1.87

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP04120_001	EnsemblPlants:GSMUA_AchrUn_randomT04120_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG04120_001	ncoils:Coil	PANTHER:PTHR21654	PANTHER:PTHR21654:SF31
SEG:seg	UniParc:UPI0002950BFE	UniProt:M0U674	MapMan:15.5.20	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04120_001]

Coordinates

chrchrUn_random:+:17865841..17867697

Molecular Weight (calculated)

50822.7 Da

IEP (calculated)

6.971

GRAVY (calculated)

-0.828

Length

469 amino acids

Sequence
(BLAST)

001: MQSGYGGVSE IQQFMVDSCG SSLFSMSTAN PNPAAAAGAA AATPTNIHSA ALHPLKYHPL PQPHHPQPLP PPPLPPHFSH FHSIPITQQL FHQTTHPFQL
101: FHPQQHYLEP RRFIPQHHLG LDQESAPETS PSPTRIIPGS SGGGGPSFLS ASMSFKLAVN ESSGGGSPQG MNDDDGILQG DDASESRLHH WQREDDESAI
201: KELSWRPLDI DYISRNNKRC KDEEPAASNG RYTKKSKEVA GSDHVQVAGG GGSSNYKIFS ELEAICKPGG SSTNRGGGTN RTGSGSALTG DETPLLHVTP
301: TAPVGLPAAD RVGGSETSAG EEATAQEFSK GNGRRRRKRW QRQLSSVATF FESLVKQLMD HQEGLHGKFL EVMERREKER TSREDARRKQ EAAKSSREAA
401: ARAQERALAS SREAAIISFI EKITGESLNL PSKPQFPSLT PDADDANKED NTTDTDNRQI EPRGSRSRG

Best Arabidopsis Sequence Match ( AT1G76880.1 )
(BLAST)

001: MMQLGGGTPT TTAAATTVTT ATAPPPQSNN NDSAATEAAA AAVGAFEVSE EMHDRGFGGN RWPRQETLAL LKIRSDMGIA FRDASVKGPL WEEVSRKMAE
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL

Arabidopsis Description

Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6K3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.