Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P11760_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 38.23 | 48.11 |
| GSMUA_Achr9P18800_001 | Banana | nucleus | 38.37 | 46.62 |
| GSMUA_Achr11P... | Banana | nucleus | 42.23 | 46.32 |
| GSMUA_Achr2P11910_001 | Banana | nucleus | 40.66 | 44.53 |
| GSMUA_Achr4P24780_001 | Banana | nucleus | 41.65 | 43.65 |
| GSMUA_Achr1P04100_001 | Banana | nucleus | 39.8 | 43.53 |
| GSMUA_Achr5P19950_001 | Banana | nucleus, plastid | 39.52 | 41.97 |
| GSMUA_Achr4P29130_001 | Banana | nucleus | 41.08 | 41.2 |
| GSMUA_Achr8P11770_001 | Banana | nucleus | 9.13 | 37.43 |
| Zm00001d032453_P001 | Maize | nucleus | 39.52 | 35.33 |
| Zm00001d013849_P001 | Maize | nucleus | 38.66 | 34.88 |
| EER91374 | Sorghum | nucleus | 40.09 | 34.82 |
| KXG40355 | Sorghum | nucleus, plastid | 38.23 | 34.31 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 40.37 | 34.18 |
| TraesCS1A01G176700.2 | Wheat | nucleus | 39.8 | 34.15 |
| TraesCS1D01G162400.1 | Wheat | nucleus, plastid | 39.66 | 34.03 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 39.09 | 33.66 |
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 37.66 | 33.63 |
| TraesCSU01G029700.1 | Wheat | nucleus | 37.52 | 33.42 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 37.23 | 32.91 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 31.95 | 32.37 |
| Zm00001d027335_P001 | Maize | nucleus | 37.09 | 32.14 |
| GSMUA_Achr8P07630_001 | Banana | nucleus | 16.69 | 29.4 |
| GSMUA_Achr7P04610_001 | Banana | nucleus | 17.83 | 25.83 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 21.54 | 22.57 |
| GSMUA_AchrUn_... | Banana | nucleus | 6.13 | 20.09 |
| GSMUA_AchrUn_... | Banana | nucleus | 12.7 | 18.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.97 | 18.05 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P00580_001 | EnsemblPlants:GSMUA_Achr2T00580_001 | EnsemblPlantsGene:GSMUA_Achr2G00580_001 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| InterPro:SANT/Myb | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF13 | PFAM:PF13837 | PFscan:PS50090 | SEG:seg |
| SMART:SM00717 | UniParc:UPI0002964D2D | UniProt:M0S3Z9 | MapMan:15.5.20 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G00580_001]
Coordinates
chr2:-:3820874..3823869
Molecular Weight (calculated)
78749.3 Da
IEP (calculated)
9.961
GRAVY (calculated)
-0.757
Length
701 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRIPGGTDP LHPPAEAASP ISSLPPPDAT ANLDELTPAV AGNEEAEPSG VPGNRWPRKE TLALLKIRSE MDVAFRGATF KSPLWEDVSK VVTVSLGSLL
101: HHLVKLAEMG YKRSSKKCKE KFENVHKYYK RTKEGRAGQQ DGKAYHFFSQ LEAIHNRSGG GAITLSAAVS QPTPASFTAG VLGPHGFSSS AAAANGINFP
201: WNSSSSSTES DEEDTEEAGE NQEGRKRKRS RSSRARRQLM NFSEAIMKQV MERQEAMEQK FLEAIKKREH ERMIREEEWR RQEMALLSRE QELLAQERAV
301: AASRDTAVIS YLQKISGQSK PLPAATTTPR QAQTPQEQKP PPPVPISSET DQGILGSGSF EPPSSSRWPK AEVHALIQLW TGLESRYQEA GPRVPLWEEI
401: SANMQRLGYS RSAKRCKEKW ENINKYFKKV KDNSKQRPED SKTCPYFYQL DAIYRKKLLG HGGRGGGDGD GRGSVGVQQQ QEQDPKCSPV PQERADNVVQ
501: MQHQRQTPSE AKYKNGNDSN RNGGNSKQAQ TSNGGHPPSF FEEGMNKVRR AYPSSISFVM QRPRRPQRLQ VPSCLWFSSY CNLHQFSLLP LGCTTFSFLR
601: QHNSHVRVLA ANTPISVLLL PCPICIIKRD LMWIKNPSAH ISYKMPFQIE RGSHRLRKRE VKEMVYRFTH TACMCQSSFL YSWPQYLAGG NMMEFGAFSN
701: H
101: HHLVKLAEMG YKRSSKKCKE KFENVHKYYK RTKEGRAGQQ DGKAYHFFSQ LEAIHNRSGG GAITLSAAVS QPTPASFTAG VLGPHGFSSS AAAANGINFP
201: WNSSSSSTES DEEDTEEAGE NQEGRKRKRS RSSRARRQLM NFSEAIMKQV MERQEAMEQK FLEAIKKREH ERMIREEEWR RQEMALLSRE QELLAQERAV
301: AASRDTAVIS YLQKISGQSK PLPAATTTPR QAQTPQEQKP PPPVPISSET DQGILGSGSF EPPSSSRWPK AEVHALIQLW TGLESRYQEA GPRVPLWEEI
401: SANMQRLGYS RSAKRCKEKW ENINKYFKKV KDNSKQRPED SKTCPYFYQL DAIYRKKLLG HGGRGGGDGD GRGSVGVQQQ QEQDPKCSPV PQERADNVVQ
501: MQHQRQTPSE AKYKNGNDSN RNGGNSKQAQ TSNGGHPPSF FEEGMNKVRR AYPSSISFVM QRPRRPQRLQ VPSCLWFSSY CNLHQFSLLP LGCTTFSFLR
601: QHNSHVRVLA ANTPISVLLL PCPICIIKRD LMWIKNPSAH ISYKMPFQIE RGSHRLRKRE VKEMVYRFTH TACMCQSSFL YSWPQYLAGG NMMEFGAFSN
701: H
001: MMQLGGGTPT TTAAATTVTT ATAPPPQSNN NDSAATEAAA AAVGAFEVSE EMHDRGFGGN RWPRQETLAL LKIRSDMGIA FRDASVKGPL WEEVSRKMAE
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6K3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.