Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P18800_001 | Banana | nucleus | 51.72 | 57.37 |
| GSMUA_Achr4P24780_001 | Banana | nucleus | 57.66 | 55.16 |
| GSMUA_Achr1P04100_001 | Banana | nucleus | 53.75 | 53.67 |
| GSMUA_Achr8P11760_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 43.12 | 49.55 |
| GSMUA_Achr11P... | Banana | nucleus | 49.22 | 49.3 |
| GSMUA_Achr4P29130_001 | Banana | nucleus | 51.09 | 46.78 |
| GSMUA_Achr5P19950_001 | Banana | nucleus, plastid | 47.34 | 45.91 |
| GSMUA_Achr8P11770_001 | Banana | nucleus | 11.41 | 42.69 |
| GSMUA_Achr2P00580_001 | Banana | nucleus | 44.53 | 40.66 |
| Zm00001d032453_P001 | Maize | nucleus | 48.75 | 39.8 |
| Zm00001d013849_P001 | Maize | nucleus | 47.03 | 38.74 |
| EER91374 | Sorghum | nucleus | 48.59 | 38.54 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 47.34 | 37.22 |
| TraesCS1A01G176700.2 | Wheat | nucleus | 47.5 | 37.21 |
| TraesCS1D01G162400.1 | Wheat | nucleus, plastid | 47.5 | 37.21 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 47.97 | 37.08 |
| KXG40355 | Sorghum | nucleus, plastid | 43.75 | 35.85 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 42.81 | 34.55 |
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 42.34 | 34.52 |
| Zm00001d027335_P001 | Maize | nucleus | 43.28 | 34.24 |
| TraesCSU01G029700.1 | Wheat | nucleus | 42.03 | 34.18 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 35.16 | 32.51 |
| GSMUA_Achr8P07630_001 | Banana | nucleus | 18.12 | 29.15 |
| GSMUA_Achr7P04610_001 | Banana | nucleus | 19.38 | 25.62 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 23.12 | 22.12 |
| GSMUA_AchrUn_... | Banana | nucleus | 6.88 | 20.56 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.44 | 16.91 |
| GSMUA_AchrUn_... | Banana | nucleus | 11.56 | 15.78 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P11910_001 | EnsemblPlants:GSMUA_Achr2T11910_001 | EnsemblPlantsGene:GSMUA_Achr2G11910_001 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| PANTHER:PTHR21654 | PANTHER:PTHR21654:SF13 | PFAM:PF13837 | PFscan:PS50090 | SEG:seg | UniParc:UPI0002961512 |
| UniProt:M0S782 | MapMan:15.5.20 | : | : | : | : |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G11910_001]
Coordinates
chr2:+:14526503..14529252
Molecular Weight (calculated)
70343.3 Da
IEP (calculated)
9.817
GRAVY (calculated)
-0.759
Length
640 amino acids
Sequence
(BLAST)
(BLAST)
001: MQQQGGSRYG VPPCEMTPFS PEPPASRAHL LGIPGPEPLQ DPPLAEAPSP LSSRPPAANF DELAPGAAGG NFPEDDGEGG ERGGSGATGN RWPRQETLAL
101: LQIRSDMDSA FRDATLKGPL WEEVSRSLPL VSQCVILSLS YIIPFFRSQP ILIRQIISLD RCLRFPDAKS CIPRGRLIAF NFLLSPSKLA ELGYKRSAKK
201: CKEKFENVHK YYKRTKDGRA GRQDGKSYRF FSQLEALHGG SSGGGGGATG MAGPPASRAQ PISAVAPSTL TSQEGRKRKR GGGDSGSSRK MMAFFDRLMK
301: QVMERQEAMQ QRFLDAIEKR EQDRMIRDEA WRRQEMTRLN REQELLAQER AMAASRDTAI ISYLQKLSGQ TIPMPTMPAT PQQQQRPPAS LVLNTEPQDA
401: EDGVNLEPMS SSSRWPKTEV HALINLRSGL DSKYHEAGPK GPLWEEISAG MQRLGYNRSA KRCKEKWENI NKYFKKVKDS NKHRPDDSKT CPYFHQLDAL
501: YRNRLLGSGS NVGTQRQEGQ EVNPASNQQQ SGAPMNLSST PPLHQPPAEA ESKNEKNCSN NSGCDGNSEG GGGSNAIQAQ TGNGGLPSSF FDEGLKKVSA
601: TPPLSLPTNL CIFAGDIITW WIDAALKTVR QHGQRRGGRR
101: LQIRSDMDSA FRDATLKGPL WEEVSRSLPL VSQCVILSLS YIIPFFRSQP ILIRQIISLD RCLRFPDAKS CIPRGRLIAF NFLLSPSKLA ELGYKRSAKK
201: CKEKFENVHK YYKRTKDGRA GRQDGKSYRF FSQLEALHGG SSGGGGGATG MAGPPASRAQ PISAVAPSTL TSQEGRKRKR GGGDSGSSRK MMAFFDRLMK
301: QVMERQEAMQ QRFLDAIEKR EQDRMIRDEA WRRQEMTRLN REQELLAQER AMAASRDTAI ISYLQKLSGQ TIPMPTMPAT PQQQQRPPAS LVLNTEPQDA
401: EDGVNLEPMS SSSRWPKTEV HALINLRSGL DSKYHEAGPK GPLWEEISAG MQRLGYNRSA KRCKEKWENI NKYFKKVKDS NKHRPDDSKT CPYFHQLDAL
501: YRNRLLGSGS NVGTQRQEGQ EVNPASNQQQ SGAPMNLSST PPLHQPPAEA ESKNEKNCSN NSGCDGNSEG GGGSNAIQAQ TGNGGLPSSF FDEGLKKVSA
601: TPPLSLPTNL CIFAGDIITW WIDAALKTVR QHGQRRGGRR
001: MSGNSEGLLE SSGGGVGGSV EEEKDMKMEE TGEGAGSGGN RWPRPETLAL LRIRSEMDKA FRDSTLKAPL WEEISRKMME LGYKRSSKKC KEKFENVYKY
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
101: HKRTKEGRTG KSEGKTYRFF EELEAFETLS SYQPEPESQP AKSSAVITNA PATSSLIPWI SSSNPSTEKS SSPLKHHHQV SVQPITTNPT FLAKQPSSTT
201: PFPFYSSNNT TTVSQPPISN DLMNNVSSLN LFSSSTSSST ASDEEEDHHQ VKSSRKKRKY WKGLFTKLTK ELMEKQEKMQ KRFLETLEYR EKERISREEA
301: WRVQEIGRIN REHETLIHER SNAAAKDAAI ISFLHKISGG QPQQPQQHNH KPSQRKQYQS DHSITFESKE PRAVLLDTTI KMGNYDNNHS VSPSSSRWPK
401: TEVEALIRIR KNLEANYQEN GTKGPLWEEI SAGMRRLGYN RSAKRCKEKW ENINKYFKKV KESNKKRPLD SKTCPYFHQL EALYNERNKS GAMPLPLPLM
501: VTPQRQLLLS QETQTEFETD QREKVGDKED EEEGESEEDE YDEEEEGEGD NETSEFEIVL NKTSSPMDIN NNLFT
Arabidopsis Description
GT-2Trihelix transcription factor GT-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39117]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.