Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P24780_001 | Banana | nucleus | 59.97 | 51.72 |
| GSMUA_Achr2P11910_001 | Banana | nucleus | 57.37 | 51.72 |
| GSMUA_Achr1P04100_001 | Banana | nucleus | 56.33 | 50.7 |
| GSMUA_Achr8P11760_001 | Banana | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 48.87 | 50.63 |
| GSMUA_Achr11P... | Banana | nucleus | 54.59 | 49.3 |
| GSMUA_Achr5P19950_001 | Banana | nucleus, plastid | 51.47 | 45.0 |
| GSMUA_Achr4P29130_001 | Banana | nucleus | 50.95 | 42.06 |
| GSMUA_Achr2P00580_001 | Banana | nucleus | 46.62 | 38.37 |
| Zm00001d032453_P001 | Maize | nucleus | 49.57 | 36.48 |
| Zm00001d013849_P001 | Maize | nucleus | 47.66 | 35.39 |
| EER91374 | Sorghum | nucleus | 49.22 | 35.19 |
| TraesCS1A01G176700.2 | Wheat | nucleus | 49.57 | 35.01 |
| KXG40355 | Sorghum | nucleus, plastid | 47.31 | 34.96 |
| TraesCS1B01G203300.2 | Wheat | nucleus | 49.05 | 34.77 |
| TraesCS1D01G162400.1 | Wheat | nucleus, plastid | 49.22 | 34.76 |
| HORVU1Hr1G046940.4 | Barley | nucleus | 49.74 | 34.66 |
| Zm00001d027335_P001 | Maize | nucleus | 46.97 | 33.5 |
| HORVU4Hr1G089120.1 | Barley | nucleus, plastid | 45.23 | 32.91 |
| GSMUA_Achr8P11770_001 | Banana | nucleus | 9.71 | 32.75 |
| TraesCS4B01G396900.1 | Wheat | nucleus | 38.13 | 31.79 |
| TraesCS5A01G558200.1 | Wheat | nucleus, plastid | 43.15 | 31.72 |
| TraesCSU01G029700.1 | Wheat | nucleus | 42.98 | 31.51 |
| GSMUA_Achr8P07630_001 | Banana | nucleus | 21.49 | 31.16 |
| GSMUA_Achr7P04610_001 | Banana | nucleus | 20.62 | 24.59 |
| GSMUA_Achr1P24120_001 | Banana | nucleus | 24.09 | 20.78 |
| GSMUA_AchrUn_... | Banana | nucleus | 7.63 | 20.56 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.41 | 16.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 12.82 | 15.78 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P18800_001 | EnsemblPlants:GSMUA_Achr9T18800_001 | EnsemblPlantsGene:GSMUA_Achr9G18800_001 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| InterPro:SANT/Myb | PANTHER:PTHR21654 | PANTHER:PTHR21654:SF13 | PFAM:PF13837 | PFscan:PS50090 | SEG:seg |
| SMART:SM00717 | UniParc:UPI00029689A6 | UniProt:M0U1I7 | MapMan:15.5.20 | : | : |
Description
Transcription factor, putative [Source:GMGC_GENE;Acc:GSMUA_Achr9G18800_001]
Coordinates
chr9:+:14921821..14924657
Molecular Weight (calculated)
63464.7 Da
IEP (calculated)
9.905
GRAVY (calculated)
-0.771
Length
577 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPFSPSAVD SGGHLLGPPG PDPVLQPPLA ASASPSCSRS LPRRIVDFEE LAPAVVGNFP DEDADKSGGT TGNRWLRQET LALLKIRSEM DASFRDATFK
101: GPLWEEVSRK LAELGYKRSA KKCKEKFENV HKYYKRTKEG RAGRHDGKSY RFFSQLDALY ISRAQPISAV APPTMAMPTR AVVPDLTLPG GPQGVSSSGA
201: AAATGLTFSS SSFSSSSSSE GSGTSRKMMA FFDRLMKQVM ERQDAMQQRF LEAIEKREQD RTIREEAWRR QEMGRLNREQ ELLVQERALA ASRDNATISY
301: LQKINSHTIS TPTMPSNAPL PPQQPSPTLP RPPQQQHEVR QHHQTSEVPV SSSRWPRAEV HALINLRTGL ESKYQEAGTK GTTLWEEISA GMQRLGYIRS
401: AKRCKEKWEN INKYFKKVKE SNKKRPEDAK TCPYFHQLDA LYRKKLLGSG IAGVGNSSGT GNTVGIQRQQ GRETDRASNQ QQSDAPTILP RQQAPRPPSP
501: QQLTAEAESK NENGTSNQNS GNSESDGDSV GITSNGGLPP SLFDEGMKKV TTGPSNLSND LCIFATISSR SDGLMLD
101: GPLWEEVSRK LAELGYKRSA KKCKEKFENV HKYYKRTKEG RAGRHDGKSY RFFSQLDALY ISRAQPISAV APPTMAMPTR AVVPDLTLPG GPQGVSSSGA
201: AAATGLTFSS SSFSSSSSSE GSGTSRKMMA FFDRLMKQVM ERQDAMQQRF LEAIEKREQD RTIREEAWRR QEMGRLNREQ ELLVQERALA ASRDNATISY
301: LQKINSHTIS TPTMPSNAPL PPQQPSPTLP RPPQQQHEVR QHHQTSEVPV SSSRWPRAEV HALINLRTGL ESKYQEAGTK GTTLWEEISA GMQRLGYIRS
401: AKRCKEKWEN INKYFKKVKE SNKKRPEDAK TCPYFHQLDA LYRKKLLGSG IAGVGNSSGT GNTVGIQRQQ GRETDRASNQ QQSDAPTILP RQQAPRPPSP
501: QQLTAEAESK NENGTSNQNS GNSESDGDSV GITSNGGLPP SLFDEGMKKV TTGPSNLSND LCIFATISSR SDGLMLD
001: MMQLGGGTPT TTAAATTVTT ATAPPPQSNN NDSAATEAAA AAVGAFEVSE EMHDRGFGGN RWPRQETLAL LKIRSDMGIA FRDASVKGPL WEEVSRKMAE
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
101: HGYIRNAKKC KEKFENVYKY HKRTKEGRTG KSEGKTYRFF DQLEALESQS TTSLHHHQQQ TPLRPQQNNN NNNNNNNNSS IFSTPPPVTT VMPTLPSSSI
201: PPYTQQINVP SFPNISGDFL SDNSTSSSSS YSTSSDMEMG GGTATTRKKR KRKWKVFFER LMKQVVDKQE ELQRKFLEAV EKREHERLVR EESWRVQEIA
301: RINREHEILA QERSMSAAKD AAVMAFLQKL SEKQPNQPQP QPQPQQVRPS MQLNNNNQQQ PPQRSPPPQP PAPLPQPIQA VVSTLDTTKT DNGGDQNMTP
401: AASASSSRWP KVEIEALIKL RTNLDSKYQE NGPKGPLWEE ISAGMRRLGF NRNSKRCKEK WENINKYFKK VKESNKKRPE DSKTCPYFHQ LDALYRERNK
501: FHSNNNIAAS SSSSGLVKPD NSVPLMVQPE QQWPPAVTTA TTTPAAAQPD QQSQPSEQNF DDEEGTDEEY DDEDEEEENE EEEGGEFELV PSNNNNNKTT
601: NNL
Arabidopsis Description
Duplicated homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C6K3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.